Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00584 ATGGCTGACCCATATGGGTTGCCGGAGGATCTCCGGCGTCTTATACCACCCAGAACCCATTTGAACCCTTCAAACACGCACCTACTTGAGCCACTGTGTCTTCACCATGGTCTAAGTGTTGTTGCTGCTTCTACTAATCCTCCCAACACCTATGACCCCAACATGGTTGGGGACGTTTTCTTCCCTCGTACCTTCACTCACTTTGCTCATCATCATGACTATTCCTCTTCAACTGGTATAAACCCTACTAATACTGCCACTGCTGCCGTCTCGGATCATGCATTCTGCAGCATGGAGAGTGCAGAGAAAGGATGGTTTGGGTTCGATTCCGGGAACAACAGGTGGCCTAGACAGGAGACCCTTTCGCTTCTAGAGATCAGATCTCGTCTTGATTCCAAGTTCAGAGAGAATAATCAGAAAGCACCCTTGTGGAATGAAATTTCTAGGATAATGGCTGAGGAATTTGGGTACCAAAGAAGTGGAAAGAAATGCAAAGAGAAGTTTGAGAATTTGTACAAGTATTACAAGAAGACGAAGGAAGGTAAAGCTAGTAGACAAGATGGGAAGCACTACAGGTTCTTCAGGCAGCTTGAAGCAATATGTGGAGACCAAGCAAACACAAATCATGCCTCAACTTCAGATAAAGCCCATCGTGCTGGTGGAAACAATGCTAATATTCAAACACCTACCATCACAATCAACCAAGACCATAATGGAGATTCTAATAATAACCCCAAGTGCTCAGAGAGCCTCAGCATCTCAAATTCATCTGAATTCGAGACATCCTCTTCTGAAAACAACGAGGAGGATCTTTCAGCCATTGCATTCATGATGAAGCAGTCAAGGGAGAAGCAGAAAGGGTTAGATAAAAATCACAGTGATCATAGGAGGGTAAAAAAAAGCTGGAGAGCCAAAGTGGAGGAGATTGTGGATTCCCACATGAGGAAGATCATAGAGACTCAAGATGCTTGGATGGAGAGAATGTTGAGCGTTGTTGAACAAAGAGAGCAAGAGATGACATCTAAGGAGGAAGAAAGGAAGAGGAAAGAGTCAATGTGGTTTGACCAACAGGTGCATGAACTGTGGGCTAAAGAGAAAGCATGGGTTGAAGCAAGAGATGCTGCATTAATAGAGGTTGTGAGGAAACACATTGGGATAGGACTTGAAGCACTGCCCCTGGATGAAGCTATGGTTGAAGAACCAGCAAATACTAAGAACAAGACCCAAGGAAACATTGATACCAATGAATTTCCCTCCGAGGGTGTTGATCAAAGAAGTAGCAGTAGGTGGACAGAAATGGAGATTTCAAATCTGATACAGCTAAGGACTGGTTTTGAGCAACGATTCAGAGAAAATGGGTACTTGGAGAGTGGCCTCTGGGATGAAATATCAGCAAAACTGGTTTGTTTGGGGTTTGATAGGAGTGGAAGTGAGTGCAAGCAAATATGGGATGAGATCAGCATCTCTCTGAGAAGGACAGTGGATGAGCGTGATGGTGCCAAAAGAAGGCCTTGGTATTTGGGACTTAAGGTGACGGATGATGATGATCTTTGA 1554 0.444 MADPYGLPEDLRRLIPPRTHLNPSNTHLLEPLCLHHGLSVVAASTNPPNTYDPNMVGDVFFPRTFTHFAHHHDYSSSTGINPTNTATAAVSDHAFCSMESAEKGWFGFDSGNNRWPRQETLSLLEIRSRLDSKFRENNQKAPLWNEISRIMAEEFGYQRSGKKCKEKFENLYKYYKKTKEGKASRQDGKHYRFFRQLEAICGDQANTNHASTSDKAHRAGGNNANIQTPTITINQDHNGDSNNNPKCSESLSISNSSEFETSSSENNEEDLSAIAFMMKQSREKQKGLDKNHSDHRRVKKSWRAKVEEIVDSHMRKIIETQDAWMERMLSVVEQREQEMTSKEEERKRKESMWFDQQVHELWAKEKAWVEARDAALIEVVRKHIGIGLEALPLDEAMVEEPANTKNKTQGNIDTNEFPSEGVDQRSSSRWTEMEISNLIQLRTGFEQRFRENGYLESGLWDEISAKLVCLGFDRSGSECKQIWDEISISLRRTVDERDGAKRRPWYLGLKVTDDDDL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00584 517 FunFam trihelix transcription factor PTL-like 115 177 - -
Spst10g00584 517 Gene3D - 430 492 - -
Spst10g00584 517 Gene3D - 115 177 - -
Spst10g00584 517 ProSiteProfiles Myb-like domain profile. 113 172 IPR001005 -
Spst10g00584 517 Coils Coil 325 352 - -
Spst10g00584 517 Pfam Myb/SANT-like DNA-binding domain 113 200 IPR044822 -
Spst10g00584 517 Pfam Myb/SANT-like DNA-binding domain 428 501 IPR044822 -
Spst10g00584 517 MobiDBLite consensus disorder prediction 206 267 - -
Spst10g00584 517 PANTHER FI21293P1 78 503 - -
Spst10g00584 517 CDD GT1 428 493 - -
Spst10g00584 517 MobiDBLite consensus disorder prediction 402 426 - -
Spst10g00584 517 FunFam Trihelix transcription factor GT-2 430 492 - -
Spst10g00584 517 SMART sant 426 489 IPR001005 -
Spst10g00584 517 SMART sant 111 174 IPR001005 -
Spst10g00584 517 CDD GT1 113 179 - -
Spst10g00584 517 ProSiteProfiles Myb-like domain profile. 422 487 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00584 Spst-Chr10 5922356 5924796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00584 114 492 Trihelix Transcription Factor Family AT5G03680 45.113 1.58e-91 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Spst10g00584 Myb_DNA-bind_4 4.5e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00584 - - gmx:100787750 843.188