Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00573 ATGGATGTGCCGAAGCACCGCGCCACTCGAACAACCTCTCTCAGGGATGTCTCCGACTCCTTCAAGATGGAAGGCACCGGAAGCTGGGACGTCCTCGAATGGACCAAAATTGAGCCAATTTCGCGCTTCGTCCCGCACGGGAATCTCGATTTCTTGATCGAGGCGGAGCAAGTTATCGCCGAAAATTCAGCACACAAAAAAAAGAGCCGTGTTGAGCACATGTCAGCTTGTGTACAAAAACAAGTTGGACCATGTGTAGATTGGGAAAAAATAATCCAAACGGTGCAGGAAACACTAGAAAAGTTGTTTGCAAAATCACAGTGGCAGTCAATGGCAGCTGGCATTGGTCAACAATGTAGAAGAGAAACACTCGGACATGGTGTTGTTCTTGTTAATATAGATGATGCGGGCACATTGATGGTAACAAATTTCCGTCTTATTTTTCTGAGTGAGGGAACTAGAAAAGTTATTGCCCTTGGAACAATACCACTAGCAACCATTGAGAAGTTTAACAAGATAGCTGTAAAGGTTCAGTCAAATAGTCGTCAAGTAGACAAGACACCAGCACCGAGACTGCTCCAGAGACGTGTGGTATTTGATGCGTTACTGAGGTGTACAAAGCCAACAAGATTATGGGATCTTTATGCTTTTGCATCAGGACCTTCAAGGTTTAAGAATACTACTCCACTGGTCCGTTTACTGGATGAATATTGTCGGCTTCTTTGCCTAGGTTCTTATCATGCAACAGTTGATATAATTGAAAATGGGTCCTTCACCTTGTCAAATGACCTATGGAGAATAAGTAGCGTGAATTCCAATTATACAATGTGCCCGAGTTATCCATTTGCTTTGGTTGTTCCAAAGATCATTAGTGATGATGAAGTGCTCCAGGCATGCAGCTTCCGTGCAAGATGCAGACTACCTGTAGTTTCATGGTGTCATCCATTGACAGGAGCAGTTGTTGCTCGATCTTCTCAACCCTTAGTTGGTCTTATGAACACGAGGAGCAACATAGATGAAAAACTTGTGGCTGCACTCTGCACCAAACTGGATAATGGCACAAGGAGAATGGGCAGGGGTGTTTCTGACAGCAGAACTGTGATGAAGCAATTGTGTTTTAGGAGGACGAAGTTGGGCCGCTACTGGATGTGCCCATTTAAGGGTGGAGGGAAGAAACCACAAAACTTCCTTTTCCAGCTTTTGATGGGAATCGATATTGACTTTGAAGAGCCGAATAAAGAAGACTTTGCAGTGGAGACAGATTCTATGATGCAGGGTGATTATGGAAATCATGAGGACCCATTGTCAGATTTTGCAAGATTGAAGCACTCAGGTTATTTAGGGACATATTTGGAGGAATTTGATGAATTGCTAGCTTTAGCAGGAGTAGACAATTCCATTGCCTTAGCATATTCTTATTGGAAGAAGCTTACAGGATCAAGAAACCTTGGTAATCATGAGACCAGAAGAACCACATGGAGAAATCAGAACCTAGTGAAAAAGACGAGAATTCATATTTCAGACACCCCCACATATTGGGGGAAGGTAGGAGACAACCATATGCAGCGGACAAGGGCATGTGCTCTGAAATGTCCAATTACTAGGGAATTGGGGGAGATCAAAGCCAACTTCAAGGAGCTCACACTTAAATTTTGGAGAGAACAGCAAGTAGTTGTGCTTAGAGGGGATCAATCTCGCTACAAGGCTTCTATTTCAGTTCAATCAACAGTAAAAATGATGGAGGAGGTAGAGCTGGGAAAGTTATATATTGTTGATGCACGGCCAAGAAAAAATGCATTGGCTAATGGGGCCATGGGAGGTGGTTCAGAATCATCATCAAACTATTTTCAATCTGAGCTAGTCTTTTTGGGGATAGAAAACATCCATGCGATGAGAGACAGCTTTGTTCGGCTCCGAGAATGCATGGACACGCATGGCAGAACGTCATCAGATGGAATGTCCTCCTTTTTGAGACAAGGTGAGTCAACGTGGGGTGGTGGCAATCTAAGTAGTATGTCTGCATCAGTATCGACCCTTGGAGAGAGTGGATGGTTACTACATGTTCAGAATGTATTGGCTGGAGCAGCGTGGATAGCTGCTCGTGTTGCTATGGAAAATGCGTCTGTTCTTGTGCATTGCAGCCACCTTACACCTCCCACCCCCCTCTCCCTTTTGTTTATTGGCAGTGATGGATGGGATAGGACAAGCCAGTTGGTTTCCCTTGCTAATTTGTTGCTTGATCCGTATTATAGGACATTCTCAGGGTTTCAGGCACTCATTGAAAAAGACTGGCTTGCCTTTGGTCATCCATTTTCTGATCGGGTGGCAATGCCATCTGTATCTGGAACTGGCAATGTGCCTTTCGAGTTAACTAGGCAGCCTTCAACTGGAAATTTAGCACCATCACCCGTGCGCCAGTCATCAGGAACATTCTCTTCACAACCTCCTGCTTCATCTCACTCACATAACAACTATTCTCCTATTTTTTTGCAGTGGGTTGATTGCGTTTCACAATTGTTGCGGATTTATCCTTTTGCTTTTCAGTTCTCTGCGGCTTTCCTGGTGGACTTCATAGACTGCATGCTTTCGTGTCGTTTTGGAAACTTCTTATGTAACAGTTGTCCTGATACTGGTTATTGTATTTATTCTGATTGCAATTTTCTTAGCGAGAAGGAGAGGCAGCAATTCAATGTTTTTGAGGCATGTGGATGTCTATGGGTATACTTAGCTGATTTGAGGACATTAGAAGGAGGATCCCATGTGCATTACAATCCCTTCTATGATCCACTCAAGCATAGTGGTCCACTTCTGCCCCCAGCAGCAGCATTGGCCCCTACTTTGTGGCCCCAATTCCACCTTCGTTGGGCATGCCCAGAAGAAGCACAAGCTGGGGAGATCGAAGCACAATGCAGGAAGATAGTTATGAAATGCTCTGAGTTGCAAAAGGCTAAAGAAATGGCAGAAAGGAAAGCTAAAGAAGTTGCAAATTCGATGGAGTCACTGAATGCAGAATTACGACGTGAGAAGCAGTTAAACAGCTCAGCTATGAACACGGCAAAGAGTATGAGCAAAGAAAATATTGCCATAAAGCGTGCAATCCAGTCTATGGGGTGTAAGGTTCAAGTCTCTGGTAGTGAATGCATTGTTGACATTGAAAGCAACCCAGCTGTGTGTTGTTCCTCTAGGAAAGAGTCAGGTAGTAATTTGCGTGATGACAAAGTTTCAGTACAGGTTGCAGCAGATGATGTTGATGGAAACAGTGCGATTAGTCGGGTATGTGAATCATTATGCCCATTTGGCTCTGAAGTTGGAGGCTGTAAGTGGCCAAATGGTGGTTGTGCTCAACTAGGTAGCCAGTATGTTGGCCTGAAGGCAAACTTTGATGCATTTGACCAACTATCAATTGATGATAGTTATTTCAAGTATGAGTGA 3432 0.4406 MDVPKHRATRTTSLRDVSDSFKMEGTGSWDVLEWTKIEPISRFVPHGNLDFLIEAEQVIAENSAHKKKSRVEHMSACVQKQVGPCVDWEKIIQTVQETLEKLFAKSQWQSMAAGIGQQCRRETLGHGVVLVNIDDAGTLMVTNFRLIFLSEGTRKVIALGTIPLATIEKFNKIAVKVQSNSRQVDKTPAPRLLQRRVVFDALLRCTKPTRLWDLYAFASGPSRFKNTTPLVRLLDEYCRLLCLGSYHATVDIIENGSFTLSNDLWRISSVNSNYTMCPSYPFALVVPKIISDDEVLQACSFRARCRLPVVSWCHPLTGAVVARSSQPLVGLMNTRSNIDEKLVAALCTKLDNGTRRMGRGVSDSRTVMKQLCFRRTKLGRYWMCPFKGGGKKPQNFLFQLLMGIDIDFEEPNKEDFAVETDSMMQGDYGNHEDPLSDFARLKHSGYLGTYLEEFDELLALAGVDNSIALAYSYWKKLTGSRNLGNHETRRTTWRNQNLVKKTRIHISDTPTYWGKVGDNHMQRTRACALKCPITRELGEIKANFKELTLKFWREQQVVVLRGDQSRYKASISVQSTVKMMEEVELGKLYIVDARPRKNALANGAMGGGSESSSNYFQSELVFLGIENIHAMRDSFVRLRECMDTHGRTSSDGMSSFLRQGESTWGGGNLSSMSASVSTLGESGWLLHVQNVLAGAAWIAARVAMENASVLVHCSHLTPPTPLSLLFIGSDGWDRTSQLVSLANLLLDPYYRTFSGFQALIEKDWLAFGHPFSDRVAMPSVSGTGNVPFELTRQPSTGNLAPSPVRQSSGTFSSQPPASSHSHNNYSPIFLQWVDCVSQLLRIYPFAFQFSAAFLVDFIDCMLSCRFGNFLCNSCPDTGYCIYSDCNFLSEKERQQFNVFEACGCLWVYLADLRTLEGGSHVHYNPFYDPLKHSGPLLPPAAALAPTLWPQFHLRWACPEEAQAGEIEAQCRKIVMKCSELQKAKEMAERKAKEVANSMESLNAELRREKQLNSSAMNTAKSMSKENIAIKRAIQSMGCKVQVSGSECIVDIESNPAVCCSSRKESGSNLRDDKVSVQVAADDVDGNSAISRVCESLCPFGSEVGGCKWPNGGCAQLGSQYVGLKANFDAFDQLSIDDSYFKYE 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00573 1143 Gene3D - 128 187 IPR011993 -
Spst10g00573 1143 SUPERFAMILY PH domain-like 131 218 - -
Spst10g00573 1143 ProSiteProfiles Myotubularin phosphatase domain. 246 952 IPR010569 -
Spst10g00573 1143 PANTHER MYOTUBULARIN-RELATED 70 1053 IPR030564 -
Spst10g00573 1143 Coils Coil 977 1018 - -
Spst10g00573 1143 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 256 956 IPR029021 -
Spst10g00573 1143 CDD PTP-MTM-like 587 838 - -
Spst10g00573 1143 MobiDBLite consensus disorder prediction 791 819 - -
Spst10g00573 1143 Pfam Myotubularin-like phosphatase domain 575 873 IPR010569 -
Spst10g00573 1143 Pfam Myotubularin-like phosphatase domain 215 368 IPR010569 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00573 1 61 Protein tyrosine phosphatase (PTP) family AT3G10550 50.000 1.38e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00573 K18081 - gmx:100789349 911.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00573 10 5810370 5829084 Spst10g00573 10 5810370 5829084 ECH