Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst10g00519 | ATGCTTCTTTCTATGGGGCCTCTCTTGCTGCTTCTATGTTTTTGTACGTTGTTATATGCTGCTTCTGCCTTGAATTCTGATGGGTTGGCATTGCTGTCCCTCTCCAGGGACTGGACTGTTGGGTCCGTTGACATAAACTCCACATGGAAGTTGTCTGATTCCACTCCATGCTCGTGGGCAGGAGTGCATTGTGATCATGCCGGTAATGTGGATTCTCTGAACCTCAGTAGATATTCCATTTCTGGCCAATTAGGTCCTGATCTTGGACGTTTGAATAACTTGCAAACCATAGACTTGTCATATAATAATCTCTCTGGAAAAATCCCCCCAGAATTAAACAACTGTAGCATGCTTGAGTACATAGACCTTACTGTAAACAACTTTAGTGGAGGAATACCAGATATCTTCAGAAACTTACAAGATTTGAAGTACATGGATCTCTCAGTTAACCTGCTGAGTGGTGAGATTCCTAAATCCTTGTTGGAAATTCCTCTCCTGGAAGTAGTGTATCTTAGTAACAACAGTTTAAGTGGTTCTATTCCCTCGAGTATTGGGAACATCACTAACCTTGTCATACTGGATCTTTCTTATAATCAGCTGTCAGGGACTATTCCCATATCCATTGGAAATTGTAGTAAATTAGAGAATCTGTATTTGGAAAGTAATCAACTGTGGGGTGTTATTCCGGAGAGTCTAAATAATCTCAAAAATCTAATTGAGTTATATCTCAATGATAATAGTCTTGGAGGTACTATTCAATTGGGATCTGGAAATTGCAAGAAATTGTCTAGACTAAGTTTTTCTTTCAATAACTTTAGTGGGGGTATACCAGCAAGCTTGGGGAATTGTAGTGGCCTGATAGAGTTTTATGCTGCAAGGAGTAACTTAGTTGGCAGTATACCGTCAACCTTAGGCCTCTTGACCAGCCTTTCTCTTCTATTGATTTCAGAGAACCGATTTTCTGGGAAAATACCTCCACAGATTGGTAATTGCAAATCACTGGAAGAGTTGCATTTGAATTCCAATGAACTCGAAGGAGAAATTCCCAGTGAACTGGGAAACTTGAGTAAATTACGCGATCTTAGATTGTTTGAAAACCTTTTGACAGGAGAAATTCCACTTGGCATATGGAAAATTCAAACACTTGAGCAGATCCATGTATACAGTAATAACCTTTCAGGTGAGCTACCTCTTGAGATGGCAGAACTTAAACATCTTGAGAATATCACCTTGTTTAACAACCAGTTCTCTGGAGTCATACCTCAAAGCTTAGGAATCCACAGCAGTTTGGTTGTGTTAGATTTCATGTATAATAATTTCACCGGTGCCCTCCCACCGAATCTTTGCTTTGGAAAGAAATTGATCAGGCTGAATATGGGTAGCAATCTATTTTATGGCAGCATACCTCCTGATGTTGGAAGGTGCACAACTCTTACAAGGGTAAGACTCGAGGAAAACAATTTTACTGGGGCACTTCCTGATTTTGAAACTAATCCAAATCTCTCTTACATGAGCATCAACAACAACAACATCAGTGGAGAAATTCCATCAAGTTTGGGAAACTGCACAAATCTCTCTCTTTTAGATCTATCCACGAACAACTTGACAGGTCTTGTACCCTCAGAGCTAGGAAACCTTGTGAATCTCCAGACTTTGGATCTTTCTCACAATACTTTGATAGGTCCTTTGCCACATCAACTGTCAAACTGTAACAAAATGATAAAGTTTGATGTTGGATTCAATTTCTTGAATGGTTCGTTTCCATCAAGTTTTCAGAGCTGGACTCAATTAACAACTTTAATTCTATCGGAGAATAATTTTGATGGTGGTATCCCACCTTTCTTGTCAGATTTTGAAAGGCTCAATGAGTTACGACTTGGAGGAAACATGTTTGGAGGAAACATTCCTAGATCAATTGGAGAACTGGTGGATTTGATATATGGGCTAAATCTAAGTGCTAATGGGCTGATAGGTGAGCTTCCAATTGAGATTAAAAACCTGAAGAATCTGCTAAGACTGGATCTATCTTGGAACAATTTGACAGGAAGTATACAGGTTCTTGATGAGCTCAGTTCATTATCTGAGCTCAACGTTTCATATAATTCTTTTGAAGGGCATGTGCCACAGCAGCTAACAAATTTACCAAATTCTTCTTTGTCGTTTTTGGGCAATCCTGGCCTATGTAGCTCAAATTTCACTGAAAGCAGCTATTTAAGGCCATGTGACTCAAATTCAGAAAAGTCAAAAAAGCTCAGTAAAGTTGCAACTGCGATGATAGCACTTGGATCCTTAATATCTGTTATTCTGATGCTGGGGTTAATTTATATATTTTTTATCAGAAAAATTAAGCAGGAAGTCACAATCAATGGGGAAGATGATTCCCCATCACTTCTCTATAAGGTTATGGAAGCTACAGGAAATCTAAACGATCAGTATATTATTGGAAGAGGCGGTCAGGGAGTTGTTTACAAAGCAGAACTTGGTCCAGACAATATTTTGGCTATAAAGAAGGTAGTATTTGCTAGTGATGAAGGGAAAAGCTCAAGCATGACCAGAGAAATTCAAACCCTTGGAAAGATTAGGCATCGAAATTTGGCCAAATTGGAAGGTTGCTGGTTGAGAAAAAACTATGGTCTAATTGCATACAAATACATGCCAAATGGAAGTCTGCATGATGTTTTGCATGAGAAGAGTCGATCACACGCCTTAGAGTGGAATATCCGGAATAAAATAGCTGTTGGAATTGCTCATGGATTGGCTTATCTCCATCACGACTGTGATCCTGTCATAGTGCACAGAGACATCAAAACAACCAATATACTTCTAGATTCTGAGATGGAGCCTCATATTGCAGATTTTGGTATTGCCAAGCTATTGGATCAGCATTCTACCACCACACATTCAACATCTGTCACTGGTACACTTGGTTATATAGCACCAGAGAATGCTTATACAACAACAAAGGGTAAAGAGTCCGATGTATACAGTTATGGGGTAGTTTTGTTGGAGCTGATATCCAGAAAGAAGGCATTGGATCCATCATTTATGGAAGGAACAGATATAGTTAATTGGGCTAGATCTATCTGGGAGGAAACGGGAGTTGTTGATGAAATTGTTGATTCAGAACTGGCCGATGAAATTTCAAATTCTGATGTGATGAAACAAGTTACAAAGGTGCTTTTGGTGGCTTTCAGATGTACATCAATGGATCCACGCAGCAGACCTGCGATGAGGGATGTTATCAAATATTTGTATGTAGATGCTAAAAACTCCACGTAA | 3279 | 0.3925 | MLLSMGPLLLLLCFCTLLYAASALNSDGLALLSLSRDWTVGSVDINSTWKLSDSTPCSWAGVHCDHAGNVDSLNLSRYSISGQLGPDLGRLNNLQTIDLSYNNLSGKIPPELNNCSMLEYIDLTVNNFSGGIPDIFRNLQDLKYMDLSVNLLSGEIPKSLLEIPLLEVVYLSNNSLSGSIPSSIGNITNLVILDLSYNQLSGTIPISIGNCSKLENLYLESNQLWGVIPESLNNLKNLIELYLNDNSLGGTIQLGSGNCKKLSRLSFSFNNFSGGIPASLGNCSGLIEFYAARSNLVGSIPSTLGLLTSLSLLLISENRFSGKIPPQIGNCKSLEELHLNSNELEGEIPSELGNLSKLRDLRLFENLLTGEIPLGIWKIQTLEQIHVYSNNLSGELPLEMAELKHLENITLFNNQFSGVIPQSLGIHSSLVVLDFMYNNFTGALPPNLCFGKKLIRLNMGSNLFYGSIPPDVGRCTTLTRVRLEENNFTGALPDFETNPNLSYMSINNNNISGEIPSSLGNCTNLSLLDLSTNNLTGLVPSELGNLVNLQTLDLSHNTLIGPLPHQLSNCNKMIKFDVGFNFLNGSFPSSFQSWTQLTTLILSENNFDGGIPPFLSDFERLNELRLGGNMFGGNIPRSIGELVDLIYGLNLSANGLIGELPIEIKNLKNLLRLDLSWNNLTGSIQVLDELSSLSELNVSYNSFEGHVPQQLTNLPNSSLSFLGNPGLCSSNFTESSYLRPCDSNSEKSKKLSKVATAMIALGSLISVILMLGLIYIFFIRKIKQEVTINGEDDSPSLLYKVMEATGNLNDQYIIGRGGQGVVYKAELGPDNILAIKKVVFASDEGKSSSMTREIQTLGKIRHRNLAKLEGCWLRKNYGLIAYKYMPNGSLHDVLHEKSRSHALEWNIRNKIAVGIAHGLAYLHHDCDPVIVHRDIKTTNILLDSEMEPHIADFGIAKLLDQHSTTTHSTSVTGTLGYIAPENAYTTTKGKESDVYSYGVVLLELISRKKALDPSFMEGTDIVNWARSIWEETGVVDEIVDSELADEISNSDVMKQVTKVLLVAFRCTSMDPRSRPAMRDVIKYLYVDAKNST | 1092 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst10g00519 | 1092 | Pfam | Protein kinase domain | 812 | 1083 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst10g00519 | 1092 | FunFam | LRR receptor-like serine/threonine-protein kinase RPK2 | 776 | 884 | - | - | |
Spst10g00519 | 1092 | Gene3D | Ribonuclease Inhibitor | 183 | 309 | IPR032675 | - | |
Spst10g00519 | 1092 | Gene3D | Ribonuclease Inhibitor | 310 | 474 | IPR032675 | - | |
Spst10g00519 | 1092 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 69 | 160 | - | - | |
Spst10g00519 | 1092 | Gene3D | Transferase(Phosphotransferase) domain 1 | 885 | 1091 | - | - | |
Spst10g00519 | 1092 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 930 | 942 | IPR008271 | GO:0004672|GO:0006468 | |
Spst10g00519 | 1092 | ProSiteProfiles | Protein kinase domain profile. | 808 | 1086 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst10g00519 | 1092 | Gene3D | Ribonuclease Inhibitor | 24 | 182 | IPR032675 | - | |
Spst10g00519 | 1092 | FunFam | Putative leucine-rich repeat receptor-like protein kinase family protein | 411 | 741 | - | - | |
Spst10g00519 | 1092 | ProSiteProfiles | Leucine-rich repeat profile. | 669 | 691 | IPR001611 | GO:0005515 | |
Spst10g00519 | 1092 | FunFam | Serine/threonine-protein kinase-like protein CCR4 | 885 | 1092 | - | - | |
Spst10g00519 | 1092 | SMART | LRR_typ_2 | 91 | 115 | IPR003591 | - | |
Spst10g00519 | 1092 | SMART | LRR_typ_2 | 546 | 570 | IPR003591 | - | |
Spst10g00519 | 1092 | SMART | LRR_typ_2 | 667 | 689 | IPR003591 | - | |
Spst10g00519 | 1092 | SMART | LRR_typ_2 | 307 | 331 | IPR003591 | - | |
Spst10g00519 | 1092 | SMART | LRR_typ_2 | 522 | 545 | IPR003591 | - | |
Spst10g00519 | 1092 | SMART | LRR_typ_2 | 187 | 211 | IPR003591 | - | |
Spst10g00519 | 1092 | SMART | LRR_typ_2 | 690 | 714 | IPR003591 | - | |
Spst10g00519 | 1092 | SMART | LRR_typ_2 | 235 | 259 | IPR003591 | - | |
Spst10g00519 | 1092 | SMART | LRR_typ_2 | 332 | 355 | IPR003591 | - | |
Spst10g00519 | 1092 | SMART | LRR_sd22_2 | 187 | 219 | - | - | |
Spst10g00519 | 1092 | SMART | LRR_sd22_2 | 91 | 123 | - | - | |
Spst10g00519 | 1092 | SMART | LRR_sd22_2 | 546 | 572 | - | - | |
Spst10g00519 | 1092 | SMART | LRR_sd22_2 | 235 | 267 | - | - | |
Spst10g00519 | 1092 | SMART | LRR_sd22_2 | 667 | 692 | - | - | |
Spst10g00519 | 1092 | Gene3D | Ribonuclease Inhibitor | 494 | 750 | IPR032675 | - | |
Spst10g00519 | 1092 | Pfam | Leucine rich repeat | 499 | 559 | IPR001611 | GO:0005515 | |
Spst10g00519 | 1092 | Pfam | Leucine rich repeat | 165 | 224 | IPR001611 | GO:0005515 | |
Spst10g00519 | 1092 | SUPERFAMILY | RNI-like | 72 | 558 | - | - | |
Spst10g00519 | 1092 | ProSiteProfiles | Leucine-rich repeat profile. | 93 | 115 | IPR001611 | GO:0005515 | |
Spst10g00519 | 1092 | Pfam | Leucine Rich Repeat | 93 | 115 | IPR001611 | GO:0005515 | |
Spst10g00519 | 1092 | FunFam | Leucine-rich repeat receptor-like protein kinase PXL1 | 309 | 400 | - | - | |
Spst10g00519 | 1092 | FunFam | Leucine-rich repeat receptor-like protein kinase PEPR1 | 183 | 308 | - | - | |
Spst10g00519 | 1092 | Gene3D | Phosphorylase Kinase; domain 1 | 779 | 884 | - | - | |
Spst10g00519 | 1092 | Pfam | Leucine rich repeat N-terminal domain | 25 | 65 | IPR013210 | - | |
Spst10g00519 | 1092 | SUPERFAMILY | Protein kinase-like (PK-like) | 798 | 1086 | IPR011009 | - | |
Spst10g00519 | 1092 | FunFam | Leucine-rich repeat receptor-like protein kinase PEPR1 | 23 | 182 | - | - | |
Spst10g00519 | 1092 | SUPERFAMILY | RNI-like | 398 | 720 | - | - | |
Spst10g00519 | 1092 | SMART | serkin_6 | 808 | 1086 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst10g00519 | 1092 | PRINTS | Leucine-rich repeat signature | 525 | 538 | - | - | |
Spst10g00519 | 1092 | PRINTS | Leucine-rich repeat signature | 546 | 559 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst10g00519 | Spst-Chr10 | 5243643 | 5247037 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst10g00519 | 16 | 1084 | Receptor kinase-like Gene Family | AT1G73080 | 51.240 | 0.0 | 1028 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Spst10g00519 | Pkinase | 4e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst10g00519 | - | - | gmx:100817655 | 1727.22 |