LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst10g00489	ATGGCAGAGGTGAAGCTTCATGGATTTTGGTATAGTCCCTTTACTTTGAGGGTGGTATGGACCTTAAAGTTAAAGGGTATACCATATCAAAACATAGAGGAAGACCGGTACAATAAGAGTCCTCAACTTCTTCAACTCAACCCAGTACACAAGAAAACTCCAGTGCTGGTTCATAATGAAAAGCCTTTATGTGAGTCCATGCTTATTGTTGAATACATTGATGAGATTTGGCCACATAACTCAGTGCTTCCTGCTGATCCCTACGAGAGAGCTTTGGCACGATTCTGGGTTAAGTATGCTGAGGATGAGATGTTTTCTGCATTTGTGGCATTCTTCCGTAGCAACAACGACGAAGAACGAGAGAAGAACGTAGAGAAGGTATGGGAGGTTCTCACGGTTGTTGAGAATCAGTGTTTTGGTGATGAGAAGAAAATTTTTGGGGGAGACATTATCAACATAGTGGACATAGCTTTTGGGTCCTTATTCAAATTTCTTGAGGTTGCACAAGATATTGTCGAAGCAAAGGTGCTTGAAGATGAGAAATTCCCTCACTTGCATTCATGGTATAATAATTTCAAGGATGTTCCAGTTGTTAAAGAAAACCTCCCAGACCATGAAAAAATGGTGGCTTTTATTAGGGTTATTAGAGAAAAACTCTTGGCATCGTCCTAA	672	0.4048	MAEVKLHGFWYSPFTLRVVWTLKLKGIPYQNIEEDRYNKSPQLLQLNPVHKKTPVLVHNEKPLCESMLIVEYIDEIWPHNSVLPADPYERALARFWVKYAEDEMFSAFVAFFRSNNDEEREKNVEKVWEVLTVVENQCFGDEKKIFGGDIINIVDIAFGSLFKFLEVAQDIVEAKVLEDEKFPHLHSWYNNFKDVPVVKENLPDHEKMVAFIRVIREKLLASS	223

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst10g00489	223	Pfam	Glutathione S-transferase, C-terminal domain	108	192	IPR004046	-
	Spst10g00489	223	SFLD	Glutathione Transferase (cytosolic)	1	222	IPR040079	-
	Spst10g00489	223	CDD	GST_N_Tau	4	77	-	-
	Spst10g00489	223	PANTHER	GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING	7	209	IPR045073	-
	Spst10g00489	223	Pfam	Glutathione S-transferase, N-terminal domain	3	75	IPR004045	-
	Spst10g00489	223	Gene3D	-	83	223	-	-
	Spst10g00489	223	FunFam	Tau class glutathione S-transferase	83	222	-	-
	Spst10g00489	223	CDD	GST_C_Tau	87	215	IPR045074	GO:0004364\|GO:0006749
	Spst10g00489	223	ProSiteProfiles	Soluble glutathione S-transferase C-terminal domain profile.	86	211	IPR010987	-
	Spst10g00489	223	SUPERFAMILY	Thioredoxin-like	4	104	IPR036249	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst10g00489	Spst-Chr10	5035108	5035956	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst10g00489	3	222	Glutathione S-transferase Gene Family	AT2G29450	43.694	4.35e-57	179

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst10g00489	K00799		-	gmx:547584	398.282

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