Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00485 ATGAACAATGAGGATCCTGGCATTTTAGAAAAGCAATATATAGATGCGGTGAGTCTTGGTTTAGGCGACAGAGTCTCTTCTGAGGATGATGGACGCAATATATGTCTACAGACGGGTGAAGAGTTTTCTGCAGAGTTCTTACGAGATCGAGTTGCCTTAAGAAGAATTCCTGCCATAACTGACACAGACCTGCGTCTGCCAAACTGTTTGGATGTTAATATTAAAGATAATAATCATCAGATGGTTTATGAGGATCTAAAGCATGTTCTTGGGCTTAGGAGATCAGATTCCGATAGTCTCCCGGATTTGTCAGAGATTACATTTGCCAGAGGATGTTTTGCTGAAGGTGACAACAGGACTTATTCCAATAATTTGAACAGATACCAGCCTGAATATAGCGGTTTTAGACAAGCATCGGGTACATTTTGTAGACAAATATCAGGTAATTTGTCTGAGCAAAGTGGTAGTGATCAAATTAATTCAGGACCAAACACTCCATCTATGTACGGCATTGACTCTCCTCATGCATACCATCCTTATGGATCAGTATTCTCAAAAGGTTCTTCCTATAAGAAGATAAAGTTTCTATGTAGCTTTGGAGGTAGAATACTACCAAGACCAAATGATGGGAAGCTCAGATATGTGGGTGGAGAGACACGGATAATATCAATCAAGAAGAACATGGCATGGGAGGAACTTCTTAGGAAGACTTCTGCTATCTGCAGTCAAACTCACACTATCAAGTACCAGCTTCCTGGAGAGGATCTTGATGCTCTTATATCTGTTTGTTCCAATGAGGATCTTCATCATATGATCGAGGAGTATGAAGAGCTAGAAAGAGCTGGAGGCTCTCAGCGGCTGAGGATTTTTCTCATACCTTCAAATGAATCTGAGAGTCCAGGATCCAATGAAGCAATAGTCAATCAGCAAAGTGATGCAGATTATCATTATGTTGTTGCTGTTAATGGTATGTTGGATCCAAGTCCACTAAAGAATTCCAGTGGGCTGAGTTTGGCAAGCCATACTAGCCAGTTTGGAAATGGCTCTGATTACAACAGTTCGCATTTCCATAGAGACTCATCGACATCTGCATTTGCTTCCGAGATGAAAGATTGCACCTCTGCAAATTTGACAGGCCTACTCTCAAAACCCTGTCCTCAATATTTTACAGCCCTAGCTGGCAAGTCCTTCAATCAAATGCCTCCTTTTTCTCCTGTTTGTGTACAGCCTAAAGATCCCCAAAATTCTAATGTACAGCTATTTATGGATAAACCATATAATGCTATTAATGAAAGCTTTGTCACGGAAAAAGTTCCAAGTGACAATGCTTTATATGTAGACAATACCAATTATGTTGATCCAGTTTCATACTATAACAATCTTGCTCAAGGGCCTACACACGTGAATTATCATCCTAATAATCAATATATAATGGAGTCTGACCAGATTAGGAGGCCTGGTGAGAATCTTCATCTTCATAGACAGAACAAATGCAATGACTTTGTCTCTTCTGCAATATGTAATATAAATAATACGCGTTATGAGAGGCCTTTACTTACCAATGATGGCTCATATCATTTTAACAATATTGTCTCTCATCCCCACGAGTCCACAAGTTTATTGTCAGAATCTGATTTCAGAGAGGGATCTCGGTACAGAATGTTGCATGCACGCTCTGAGTCAACACTTAACGAGAGTGATGAGAACTATAAAGTCCACTTGCAATCTCCCCTCAATGTAGAGAGGGACAATTTTCCATCATCAACAAAATTAACTCCTTTAGAAGAATGTTCATTACAGCCTGGAGAGATATTTGATAGGATAGAGCCCTTGACTAAGTATCAAAATTTGCCCATTTATGGAATGACTGATAATTTTAAGAAAGTATCAGAAATTGGTAAAGAGAGCTTGCAACGTGCAGAAAGAAGCAATGATTTCTTTGACAAAAATGTTGGAGCTATGCCCCCAGAAAATGCCAGAGATTTTAAACATTTACAGTACATCTACTCCCCGCATGGTGTTTGCTCATCTCCAGATTTACAAAGCAGTGAATGCAATGCATCTTCTTTATCATTTGTCTCTTTAGAATCCATCAAAAACCCGAGGGGGCAACCACCGGTCCCACCATTAGACAGAACCACTTCTGAGTTTTCCATGAGGAGCCGAAATTCATCAATGCATCGCCAATATGCTCTGCCGGTGGCAAAAGACAGTCAACCACTTTTCCCTGGCTCTTTCAAGTCCCAAACTGACAAAGAATCCTCATTACCCATCTCGTATATGGACATAGGTTCTTCCCTGAGAGAGGTTGTTATCCCTCTTGAAGATCCTGCGTACTACCTGCACCAAAAGGAAGAAAACACAGTCATTAAGAATCAGTCTTCTGAATATATCAATGAATTTTGTGTCAACAAGCCAGTGTCTGCTTCCAAGGGATCAATGGATTATATTTCTTCAGGCATCCAGTCGTGCTTAAAAGTTGTCTCAAATGTAGATGAAAAGGTTGAAGTTGAACCTACATCTCCTGAAAAAAGAGGGATAGAATGTGATAGTCCAGAATCTGAAAGTAAGCATGCAAAGTCTGAGGGTGGAAACTTCAACGGTGATAGAGTAATTGCTGAAACAGAGACTGAAATTTATGGTTTACAGAATATTGAGAATGATGATCTTGAAGAACTGCAAGAATTAGGATCTGGAACCTTTGGGACAGTTTATCATGGAAAGTGGAGGGGAACAGATGTTGCCATTAAGAGAATAAAAAGTAGTTGTTTTGCTGGTAGATTGTCAGAGCAAGAGCGGTTGATTAAAGATTTTTGGAGAGAGGCACAGATTCTGTCAACTCTTCACCATCCAAATGTGGTGGCCTTTTATGGGGTAGTTCCAGATGGCCCTGGTGGAACATTGGCAACAGTAACAGAATACATGGTGCATGGATCACTGAGGAATGTGCTTATGAAGAGGGAAAAAGTGCTTGATCGTCGTAAAAGGCTCCTGATCACAATGGATGCAGCCTTTGGGATGGAGTATCTGCATTTGAAAAATATTGTTCATTTTGATCTGAAGTGTGATAATTTACTTGTTAATCTGGGTGATCCTGAACGACCTGTATGCAAGGTTGGAGATTTTGGCCTATCCAGAATAAAACGTAATACACTTGTTTCGGGTGGTGTCCGAGGAACCCTTCCATGGATGGCACCTGAATTACTGGATGGTAACAGCTGTAGGGTATCTGAGAAGGTTGATATTTTCTCATTTGGCATTGCAATGTGGGAAATCTTGACTGGGGAAGAACCATATGCTAACATGCACTGTGGCGCTATCATAGGAGGTATTGTCAATAATACGCTCAGGCCTCCTATTCCAAAACGATGTGATCCCGAGTGGAAAAAACTGATGGAAGAGTGCTGGAGTCCTGATCCTGCAGCCAGACCAACCTTCACAGATATTAAAAATAGACTTCGCAACATCATTTTTGCTGGAACCAGTTCTGAAGGAAGCGTGAGAAATCAAACTTCACGCAAGAGCGACATCGCGCATTCTTCGCTTTCAAACTTCCTCTCCTCCAAGCAGCAAAAATCTCCCCATCTTCCTCAAACGGTTCCGGGGAAATCGACGCCTTTTCTGTCACCTTTGCGTTTAAGAAGAGGTGAGGAAGGTGGAACTGTCAAAGAAGTTGAAGAGGAGAAAAACAGTGGAAGTGATGGTAAGGTGATTTTTGAAAGCTTCAAGCACACTCAAGAGGACAAGAGAGACTTTGTCAGTCAAATTGGTGTTGGTGAATTAGAAAACTCAGTTGTGGATAACATTCAAGAGTCAAAGAAAAGGAAAACCCCGTTTGAAGGTGGAAATGAGAGCCAAACTGCACGAAAGCATGTGGTAGTTCTTGGAGGCGAATCAAAGTTGAAGCCAAAAAGACAAATTGAGAATGAATCTAGCAACAAAAGGCCCAGGCCTCCTTATAATCACTATGCTAATGGCCGTGGTTGGTGGGATTACGAAATGGAAGGTGTTGATAATGAGGAATTGGGCTTCAATGAAGTATGGGAGGGGGTGGGATCCACCACACTCGGGGGAATAATAGATTGGCATTGA 4092 0.4118 MNNEDPGILEKQYIDAVSLGLGDRVSSEDDGRNICLQTGEEFSAEFLRDRVALRRIPAITDTDLRLPNCLDVNIKDNNHQMVYEDLKHVLGLRRSDSDSLPDLSEITFARGCFAEGDNRTYSNNLNRYQPEYSGFRQASGTFCRQISGNLSEQSGSDQINSGPNTPSMYGIDSPHAYHPYGSVFSKGSSYKKIKFLCSFGGRILPRPNDGKLRYVGGETRIISIKKNMAWEELLRKTSAICSQTHTIKYQLPGEDLDALISVCSNEDLHHMIEEYEELERAGGSQRLRIFLIPSNESESPGSNEAIVNQQSDADYHYVVAVNGMLDPSPLKNSSGLSLASHTSQFGNGSDYNSSHFHRDSSTSAFASEMKDCTSANLTGLLSKPCPQYFTALAGKSFNQMPPFSPVCVQPKDPQNSNVQLFMDKPYNAINESFVTEKVPSDNALYVDNTNYVDPVSYYNNLAQGPTHVNYHPNNQYIMESDQIRRPGENLHLHRQNKCNDFVSSAICNINNTRYERPLLTNDGSYHFNNIVSHPHESTSLLSESDFREGSRYRMLHARSESTLNESDENYKVHLQSPLNVERDNFPSSTKLTPLEECSLQPGEIFDRIEPLTKYQNLPIYGMTDNFKKVSEIGKESLQRAERSNDFFDKNVGAMPPENARDFKHLQYIYSPHGVCSSPDLQSSECNASSLSFVSLESIKNPRGQPPVPPLDRTTSEFSMRSRNSSMHRQYALPVAKDSQPLFPGSFKSQTDKESSLPISYMDIGSSLREVVIPLEDPAYYLHQKEENTVIKNQSSEYINEFCVNKPVSASKGSMDYISSGIQSCLKVVSNVDEKVEVEPTSPEKRGIECDSPESESKHAKSEGGNFNGDRVIAETETEIYGLQNIENDDLEELQELGSGTFGTVYHGKWRGTDVAIKRIKSSCFAGRLSEQERLIKDFWREAQILSTLHHPNVVAFYGVVPDGPGGTLATVTEYMVHGSLRNVLMKREKVLDRRKRLLITMDAAFGMEYLHLKNIVHFDLKCDNLLVNLGDPERPVCKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLDGNSCRVSEKVDIFSFGIAMWEILTGEEPYANMHCGAIIGGIVNNTLRPPIPKRCDPEWKKLMEECWSPDPAARPTFTDIKNRLRNIIFAGTSSEGSVRNQTSRKSDIAHSSLSNFLSSKQQKSPHLPQTVPGKSTPFLSPLRLRRGEEGGTVKEVEEEKNSGSDGKVIFESFKHTQEDKRDFVSQIGVGELENSVVDNIQESKKRKTPFEGGNESQTARKHVVVLGGESKLKPKRQIENESSNKRPRPPYNHYANGRGWWDYEMEGVDNEELGFNEVWEGVGSTTLGGIIDWH 1363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00485 1363 MobiDBLite consensus disorder prediction 1185 1205 - -
Spst10g00485 1363 SMART serkin_6 890 1158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00485 1363 MobiDBLite consensus disorder prediction 1216 1232 - -
Spst10g00485 1363 CDD STKc_MAP3K-like 896 1153 - -
Spst10g00485 1363 MobiDBLite consensus disorder prediction 836 868 - -
Spst10g00485 1363 SUPERFAMILY Protein kinase-like (PK-like) 879 1153 IPR011009 -
Spst10g00485 1363 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 212 294 - -
Spst10g00485 1363 ProSiteProfiles Protein kinase domain profile. 890 1158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00485 1363 SMART PB1_new 207 294 IPR000270 GO:0005515
Spst10g00485 1363 MobiDBLite consensus disorder prediction 836 864 - -
Spst10g00485 1363 PRINTS Tyrosine kinase catalytic domain signature 1009 1027 IPR001245 GO:0004672|GO:0006468
Spst10g00485 1363 PRINTS Tyrosine kinase catalytic domain signature 1124 1146 IPR001245 GO:0004672|GO:0006468
Spst10g00485 1363 PRINTS Tyrosine kinase catalytic domain signature 972 985 IPR001245 GO:0004672|GO:0006468
Spst10g00485 1363 PRINTS Tyrosine kinase catalytic domain signature 1080 1102 IPR001245 GO:0004672|GO:0006468
Spst10g00485 1363 Pfam Protein tyrosine and serine/threonine kinase 892 1153 IPR001245 GO:0004672|GO:0006468
Spst10g00485 1363 SUPERFAMILY CAD & PB1 domains 208 300 - -
Spst10g00485 1363 Gene3D Phosphorylase Kinase; domain 1 883 977 - -
Spst10g00485 1363 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 883 977 - -
Spst10g00485 1363 MobiDBLite consensus disorder prediction 1185 1232 - -
Spst10g00485 1363 ProSitePatterns Protein kinases ATP-binding region signature. 896 917 IPR017441 GO:0005524
Spst10g00485 1363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1015 1027 IPR008271 GO:0004672|GO:0006468
Spst10g00485 1363 MobiDBLite consensus disorder prediction 1273 1321 - -
Spst10g00485 1363 Gene3D - 211 294 - -
Spst10g00485 1363 Gene3D Transferase(Phosphotransferase) domain 1 978 1203 - -
Spst10g00485 1363 Pfam PB1 domain 208 292 IPR000270 GO:0005515
Spst10g00485 1363 PANTHER SERINE-THREONINE PROTEIN KINASE 244 1157 - -
Spst10g00485 1363 MobiDBLite consensus disorder prediction 1295 1312 - -
Spst10g00485 1363 CDD PB1_UP2 196 292 - -
Spst10g00485 1363 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 978 1170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00485 Spst-Chr10 5009940 5025580 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00485 192 324 MAP Kinase Kinase Kinase AT1G16270 57.143 6.89e-40 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Spst10g00485 PK_Tyr_Ser-Thr 2.6e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00485 - - gmx:100810711 1836.62