Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00424 ATGAATTGTAATCACTCGCTAATGACTAAAGTCATGGAACAACAGAAAAGAGCTTCTCATGTGCTTGTATACAGAGAGTTAAAGCCACACCTGTTCATGGTCTTAGTCCAGGTGGGCTATACCTTCTTATATTTCATCACTGAAGCCTCCTTCAACCATGGGATGAGTCCTTATGTGTATGTAACCTATCGGCATATTGTGGCTTCGGTTGTGACGCTCCCTTTTGCATACTTTCTGGAGAGAGATGTTAGACCAAAGCTGACGTTTGCTCTTCTTATGGAAATTTGTGTGCTTTCTCTGCTAGGGGTTAGTGTGACCCTTAATATGTACTTCGCAAGCCTGAACTACACAAATCCGACCTTCGTTGCTTCCATGGTCAACACCATAGCTTCCCTTACCTTCATTATTGCAGTGGCAATCAGATTCGAGGTTGTTGATGTTCGAAATCCTCGTGGTATTGCAAAAGTAATTGGGACTATGATCTCCTTAGCTGGTGTTTTGATTATGACACTGTACAAAGGACCCGTCATGAGAAATTTATGGCATCCTCTAATCCATATTCCACGGAAAAGTGCTGCTATCACCGAAGACTGGTCAAAGGGTTCAATTCTTACAGTTTCAAGTTGTGTCACATGGTCTTTATGGTACATTATGCAGGCATCCACTTTGAAAAGATACCCTGCTCAACTCTCACTCACCTCGTGGATGTGCTTTGTTGGAGCAGCACAATCAGCTGTTTTTACAGTTATAGTAGAACGCGACTCTTCAGCATGGACTATGGGGCTAAACATTGACTTTTGGTCCACAATATATGGTGGAGTTGTCGTTGCTGGTTTGATAATCTACATTCAACTATGGTGCACTGACAAAAAAGGGCCAGTTTTTGTCACAATGTTTAGCCCTCTTTCTACTATATTGGTGGCAATTCTAGCCTACTTTGTCCTTGGAGAGAAACTTTATCTGGGCAGCGTGTCGATTATAGCCGCTTTCACGTATCTTTCACTTTGCTCCAAAGAGGAATGGCAACCGAGCAGAAAAGCAAGACCAAAGCTAACATTTGCTCTTTTTATAGAAATTTGTGTGATTGCTCTGTTAGGGATTAGTTTAACCATTAATCTGCACTTTGCAAGCCTGAAATACACAAATCCGACCTTTGTTGTTGCAATGCTCAAACACCATACCTACCCTTACCTTCATTCTTGCAGTGGTACTCAGTCAGTTGAGTTAAACGCAGGAACAAGTGCTGCTATCAATGAAAGTTGGTTAAAAGGTTCAGTTCTTACAGTTTCAAGCTGTCACATGGTCTATGTGGTACATCATGCAGGTGTTCACCTTAACTCGGCATCCACTTTGAAAAGATACCCTGCCCAATTGTCACTCGCCACGTGGATGGGCTTTGTTGGAGCAACACAATCCGCTGTTTTCACAGTAATAGGAGAACACGACCGTTCAGCATGGAGTATTGGGCTCAACATTGATCATACGGTGTAA 1491 0.4252 MNCNHSLMTKVMEQQKRASHVLVYRELKPHLFMVLVQVGYTFLYFITEASFNHGMSPYVYVTYRHIVASVVTLPFAYFLERDVRPKLTFALLMEICVLSLLGVSVTLNMYFASLNYTNPTFVASMVNTIASLTFIIAVAIRFEVVDVRNPRGIAKVIGTMISLAGVLIMTLYKGPVMRNLWHPLIHIPRKSAAITEDWSKGSILTVSSCVTWSLWYIMQASTLKRYPAQLSLTSWMCFVGAAQSAVFTVIVERDSSAWTMGLNIDFWSTIYGGVVVAGLIIYIQLWCTDKKGPVFVTMFSPLSTILVAILAYFVLGEKLYLGSVSIIAAFTYLSLCSKEEWQPSRKARPKLTFALFIEICVIALLGISLTINLHFASLKYTNPTFVVAMLKHHTYPYLHSCSGTQSVELNAGTSAAINESWLKGSVLTVSSCHMVYVVHHAGVHLNSASTLKRYPAQLSLATWMGFVGATQSAVFTVIGEHDRSAWSIGLNIDHTV 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00424 496 SUPERFAMILY Multidrug resistance efflux transporter EmrE 63 173 - -
Spst10g00424 496 PANTHER WAT1-RELATED PROTEIN 417 492 IPR030184 GO:0016020|GO:0022857
Spst10g00424 496 Pfam EamA-like transporter family 34 170 IPR000620 GO:0016020
Spst10g00424 496 Pfam EamA-like transporter family 200 327 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00424 Spst-Chr10 4462037 4467389 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00424 344 493 Nodulin-like Gene Family AT5G07050 26.238 1.20e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00424 - - gmx:100527877 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00424 10 4462037 4467389 Spst10g00424 10 4462037 4467389 ECH