Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Spst10g00411 | ATGGAAGCTGAGAATCTGGCCAGGTTGAGGGAGTCTCAAACACCATTGTTAGGCGGAGAGAACCCAGAGTTGCATCCTTCAGATTTTTCGGGTGTCACCCTTAAGAAAAAGGATATTCAGACTCCAAATCCATTGTTAGGTGGAGAGAACCCAGAGTTCCATCCTTCAGATTTTTCGGGTGTCACCCTTAAGAACAAGGATATTCAGACTCCAAATCCAATGCTGACTCCTTCTGCAACTCCTGGAGGTGCAGTTCTCACTTCTAGAATTGGCATGACACCAGCAAGAGATGGAAGCCTTCCACAGCCCAAAAATGAGTACCAAATAGTGATGGAACCAGTTCCAGAAGACGTCGAAGAGCCTGAGGAGAAAATTGAAGAGGATATGTATGATAGAATAGCAAGCTGA | 408 | 0.4534 | MEAENLARLRESQTPLLGGENPELHPSDFSGVTLKKKDIQTPNPLLGGENPEFHPSDFSGVTLKNKDIQTPNPMLTPSATPGGAVLTSRIGMTPARDGSLPQPKNEYQIVMEPVPEDVEEPEEKIEEDMYDRIAS | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Spst10g00411 | 135 | MobiDBLite | consensus disorder prediction | 112 | 135 | - | - | |
| Spst10g00411 | 135 | MobiDBLite | consensus disorder prediction | 1 | 84 | - | - | |
| Spst10g00411 | 135 | MobiDBLite | consensus disorder prediction | 62 | 83 | - | - | |
| Spst10g00411 | 135 | PANTHER | CELL DIVISION CYCLE 5-LIKE PROTEIN | 1 | 46 | IPR047242 | GO:0000398|GO:0000974 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Spst10g00411 | Spst-Chr10 | 4349930 | 4350476 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Spst10g00411 | 1 | 134 | MYB-Related Transcription Factor Family | AT1G09770 | 48.066 | 1.92e-31 | 115 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Spst10g00411 | K12860 | - | twl:120001939 | 142.124 |