Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00374 ATGCCTCCAACCCCTTCTTTCAAACAAAACCACCCCAACCAGACGAAGACTCCACAGTCCAAGCACCGTCTCAACTTCAATGGCCCCAAATCAGCACCAGCAATACACCCTTCTCCCAACCCCAATTCTGTTGCAAACAAGGAACCCCCTCCTGAACACCCAATTGAAGTCATTGCCAGAATCCGTGACTACCCAGATCGAAAGGATAAGCCTTTATCTGTTCTTCAAACCAATTCCAACTCGAGTTCCATCCGGGTTCGAGCTGATTTTGGGTACCGGGACTTCACCCTTGACGGGGTTTCTGTGTCTGAGGAAGAGGACCTGGATGTGTTCTATAAGAAATTTGTGGAGTCAAGGATCAATGGGGTTAAGCTTGGGGACAAATGCACCATCATGATGTATGGACCAACTGGTTCTGGGAAGAGTCACACCATGTTTGGGTGCTCAAAGCAGGCAGGGATTGTGTATAGGTCTCTGAGGGACATTCTTGGAGATGGGGATAATGCAGATGGAGATTCTGGGGATGATTCAAGAGGAGAACATCTCGGGTTGGGGACTTTTGTTCAAGTCACTGTTTTGGAGATTTACAATGAGGAGATTTATGATCTGTTGTCCACCAATGGAGGAGGTGGGGGAGGAGGGTTTGGGTTTGGCTGGCCTAAGGGTGGTAGTGCTTCAAAGGTGAAACTTGAAGTGATGGGTAAAAAGGCTAAGAATGCTACCTATATATCTGGAAATGAAGCAGGGAAGATCTCAAAAGAAATTCAGAAAGTGGAGAAGCGAAGGATTGTTAAAAGCACACTTTGTAATGACAGAAGTTCCAGAAGTCACTGCATGGTAATCCTTGATGTCCCAACTGTGGGTGGGCGTCTAATGCTTGTAGACATGGCAGGATCAGAAAATATTGAACAAGCTGGTCAAACTGGATTTGAGGCCAAAATGCAGACTGCAAAAATCAATCAAGGAAATATAGCGCTGAAGAGAGTGGTGGAGTCAATTGCAAATGGCGATTCGCATGTACCATTTAGAGACAGCAAGCTTACTATGCTTCTGCAGGATTCCTTTGAAGATGATAAGTCAAAAATTCTAATGATACTGTGTGCAAGTCCTGATCCTAAGGAGATACACAAGACAATCTCTACACTTGAATATGGGGCAAAAGCAAAATGCATAGTCCGTGGCCCTCATACTCCAGTCAAGGATGATGAATCTTCTTCTGCTGTCATTTTAGGCTCAAGAATTGCTGCAATGGATGAATTTATCTTGAAGCTACAAATGGAAAACAAGCAAAGAGAGAAAGAGCGTAACGAAGCGCACAAAAAGCTTTCGAAGAAAGAAGAGGAAATTGCTGCATTAAGAACTAAATTGAACCTGTCAGAAGGAAAAGGAACTCCACCAAGTGAGGAGGAAATTAACCTGAAGGTAAATGAACGAACTCGGCTTCTAAGACAAGAGCTGGAAAAGAAGTTGGCGGAGTGCCAAAGAATGACTAACGAGTTTGTTGAATTGGAGAGGAAGAGAATGGAAGAGAGGATACTGCAGCAGCAGGAGGAAGTTGAAACTCTGAGAAGGAGATTGGAAGAAATTGAGTTGCAGCTATCAAGCTCAAGGCAAGGGGGGAATAGTGAGGAAAATGAGTCAAAAGACATGGAGTCAAGTGGGTTTATGAGAAGGCTATTGCGCGTTTACAAAAGTGAGGAGGATCCTGGAATGGTGAAGTCAATGGATTTAGACATGGACGATCAAGAACCCCTTGGCCGTGAAGTGAACATCATTGGTGGACTTATGTGCAGGAGTAATAATGATTACAATGTTAAGCAAGACTTTTCAAACCAACCTTGCCCAAATAATTTGAATGGTGGAAAAGATGATGCTCATATTTTTGCACCCAACTTTGGCCAAAGGGTATGCCTTAGTACAGTATACGAGGAAGAAGGAGAAGGAGAAGGAGATGAAGACAAAGGGGATGAGGAAGTGGAGAAAGAAGTGATAGAGGAAACGAGGGTATGTAGTGTTGACAAGCCAAGTGGCTCCTTGGCAACGATAAACATGTCGAACACAAGTCCAATGAAAGAGGATTGCTGTTTCAATGTAAGTTCAGTGGATGAAAAGGATCTTGGGCCTTCTAGACTACTGAGAATTCAGAATATATTCACACTTTGTGGCAACCAAAGAGAACTGTCCCAGCACATTGGAACCCCAGTTCCCACAAAAAAGATATCTGATGAAACTTTTGAGCTTTCTCCTGCCAAGAGAAGTGACAAGGATTCCGTTTTCAAAACCTCCAACAAGGAGAACTTCGAACCACATAATGTTTTGGGAAATTAG 2328 0.4369 MPPTPSFKQNHPNQTKTPQSKHRLNFNGPKSAPAIHPSPNPNSVANKEPPPEHPIEVIARIRDYPDRKDKPLSVLQTNSNSSSIRVRADFGYRDFTLDGVSVSEEEDLDVFYKKFVESRINGVKLGDKCTIMMYGPTGSGKSHTMFGCSKQAGIVYRSLRDILGDGDNADGDSGDDSRGEHLGLGTFVQVTVLEIYNEEIYDLLSTNGGGGGGGFGFGWPKGGSASKVKLEVMGKKAKNATYISGNEAGKISKEIQKVEKRRIVKSTLCNDRSSRSHCMVILDVPTVGGRLMLVDMAGSENIEQAGQTGFEAKMQTAKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMILCASPDPKEIHKTISTLEYGAKAKCIVRGPHTPVKDDESSSAVILGSRIAAMDEFILKLQMENKQREKERNEAHKKLSKKEEEIAALRTKLNLSEGKGTPPSEEEINLKVNERTRLLRQELEKKLAECQRMTNEFVELERKRMEERILQQQEEVETLRRRLEEIELQLSSSRQGGNSEENESKDMESSGFMRRLLRVYKSEEDPGMVKSMDLDMDDQEPLGREVNIIGGLMCRSNNDYNVKQDFSNQPCPNNLNGGKDDAHIFAPNFGQRVCLSTVYEEEGEGEGDEDKGDEEVEKEVIEETRVCSVDKPSGSLATINMSNTSPMKEDCCFNVSSVDEKDLGPSRLLRIQNIFTLCGNQRELSQHIGTPVPTKKISDETFELSPAKRSDKDSVFKTSNKENFEPHNVLGN 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00374 775 MobiDBLite consensus disorder prediction 1 52 - -
Spst10g00374 775 MobiDBLite consensus disorder prediction 8 26 - -
Spst10g00374 775 Coils Coil 476 539 - -
Spst10g00374 775 Gene3D Kinesin motor domain 35 394 IPR036961 -
Spst10g00374 775 MobiDBLite consensus disorder prediction 533 553 - -
Spst10g00374 775 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 398 IPR027417 -
Spst10g00374 775 SMART kinesin_4 52 399 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst10g00374 775 PRINTS Kinesin heavy chain signature 267 284 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst10g00374 775 PRINTS Kinesin heavy chain signature 126 147 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst10g00374 775 PRINTS Kinesin heavy chain signature 290 308 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst10g00374 775 PRINTS Kinesin heavy chain signature 340 361 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst10g00374 775 MobiDBLite consensus disorder prediction 747 763 - -
Spst10g00374 775 MobiDBLite consensus disorder prediction 747 775 - -
Spst10g00374 775 Coils Coil 417 462 - -
Spst10g00374 775 ProSiteProfiles Kinesin motor domain profile. 54 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst10g00374 775 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 36 396 - -
Spst10g00374 775 PANTHER KINESIN-RELATED 57 639 IPR027640 GO:0003777|GO:0007018
Spst10g00374 775 Pfam Kinesin motor domain 76 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00374 Spst-Chr10 3977110 3980368 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00374 109 403 Calmodulin-binding Proteins AT5G65930 27.742 7.99e-25 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00374 - K10398 gmx:100779567 1260.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00374 10 3977110 3980368 Spst10g00374 10 3977110 3980368 ECH