Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00367 ATGCCTTTCAAGAGGTACGTCGAGATCGGGAGGATTGCTCTCGTCAACTACGGCAAGGAATATGGCAAGCTCGTCGTCATCGTTGACGTCATTGACCAGAACAGAGCACTTGTCGATGCCCCTGACATGGTCAGGTCCCAAGTCAATTTCAAAAGGCTTTCCCTAACCGATATTAAGATTGATATAAAGAGAGTCCCGAAGAAAAAAGATCTTGTTAAAGCCATGGAGGCTGCTGTAGATGTTAAGAACAAGTGGGAGAACAGCTCATGGGGCAGGAAACTCATTGTCAGAAAGAGAAGAGCAGCCCTCAGTGACTTCGATAGGTTCAAGTTAATGTTGGCCAAGATTAAGAGAGCAGCTGTGGTAAGGCAAGAGCTCTCTAAGCTGAAAAAGAGTGCTTAG 402 0.4602 MPFKRYVEIGRIALVNYGKEYGKLVVIVDVIDQNRALVDAPDMVRSQVNFKRLSLTDIKIDIKRVPKKKDLVKAMEAAVDVKNKWENSSWGRKLIVRKRRAALSDFDRFKLMLAKIKRAAVVRQELSKLKKSA 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00367 133 Gene3D - 93 128 - -
Spst10g00367 133 Pfam Ribosomal protein L14 45 118 IPR002784 GO:0003735|GO:0005840|GO:0006412
Spst10g00367 133 SUPERFAMILY Translation proteins SH3-like domain 5 94 IPR008991 -
Spst10g00367 133 CDD KOW_RPL14 7 78 IPR041985 -
Spst10g00367 133 PANTHER 60S RIBOSOMAL PROTEIN L14 1 132 IPR039660 GO:0003723|GO:0003735
Spst10g00367 133 FunFam 60S ribosomal protein L14-1 1 85 - -
Spst10g00367 133 Gene3D - 1 85 IPR014722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00367 Spst-Chr10 3759412 3760223 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00367 1 132 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 81.061 2.40e-72 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00367 K02875 - gmx:100499889 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00367 10 3759412 3760223 Spst10g00367 10 3759412 3760223 ECH