Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00363 ATGTGTTCTAACAAAGGACTCATGCTAGCATGCCAATCAGGAAATGCAGCAGGTGCAAAACATTCTAGAGGCTCCGATATTTTCGTTAGAAGTGAAAGGATTGATTCTTGCGCTGAATTTTTGATATTAGCAAGCAATGGCATATGGGAGGTGATGAAAAACCAAGAGGCTGTGAATCTGATCAGTCACATAGAGGATCCACAAGAAGCAGCTGAATGTTTGGCAAAGGAAGCTTTAATTAGGATGACCAAAAGCAACATCTCATGCTTAATCATTCGCTTTGACTGA 288 0.4062 MCSNKGLMLACQSGNAAGAKHSRGSDIFVRSERIDSCAEFLILASNGIWEVMKNQEAVNLISHIEDPQEAAECLAKEALIRMTKSNISCLIIRFD 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00363 95 PANTHER PROTEIN PHOSPHATASE 28 94 IPR015655 GO:0004722|GO:0006470
Spst10g00363 95 SUPERFAMILY PP2C-like 31 95 IPR036457 -
Spst10g00363 95 Gene3D - 6 95 IPR036457 -
Spst10g00363 95 Pfam Protein phosphatase 2C 33 87 IPR001932 -
Spst10g00363 95 ProSiteProfiles PPM-type phosphatase domain profile. 1 94 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00363 Spst-Chr10 3717888 3718332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00363 7 94 PP2C-type Phosphatase Gene Family AT3G23360 55.682 3.40e-30 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00363 - K19704 gmx:100785227 159.458