Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00341 ATGGCTCAGGATGGGAGCGTCGCCCCTGCGGACCCGGGGGCAATGACGGTTGTGAAGAAGAAGACACAGTCTTCGAGGAGTTGGATTCTGTTCGATGCCACAGGGCAGGGTTCATTGCTCGACGTGGACAAATATGCAATCATGCATAGAGTTCAGATTCATGCGCGTGATCTCAGAATACTTGATCCCTTGCTCTCTTACCCATCCACCATTCTCGGTCGTGAGAAGGCCATTGTTCTTAACTTGGAGCATATCAAAGCAATTATCACAGCTGAAGAGGTATTGCTGAGAGATCCAACAGATGAAAATGTGATCCCTGTTGTGGAGGAGCTGCAAAGGCGGTTGACTCGATTAGGTGCCGGTCTTCAACTGCAAGGACATGGTAAAGAGTATCTTGGTGGCCAAAATGATGCCGAACCAGCTGAAGAAGATGAGTCATTCTTTGAATTCCGGGCCCTGGAGATTGCTTTAGAAGCCATTTGTAGTTTTCTTGCTGCACGTACAGCAGAATTGGAGATGGCTGCTTATCCGGCTTTAGATGAACTTACGTCTAAGATTAGTAGTCGTAATTTGGACAAAGTTCGTAAATTGAAAAGTGCAATGACAAGATTGACTGCTAGAGTTCAAAAGGTTAGAGACGAGCTTGAACAATTATTGGATGATGACGATGATATGGCTGATTTATACCTGTCAAGAAAGACAGGTTCAGCTTCACCAGTTAGTGGATCAGGTGTTGTAAATTGGTTTGCTGCTTCCCCCACCATAGGTTCAAAAATATCTAAAGCAAGTCAAGCAACAGGTCGTTTAGATGAACATGACGTGGAAGAACTTGAAATGTTACTTGAGGCTTATTTTAGTGAAATAGATCATACATTGAACAAATTAACCACGCTGCGAGAGTACATTGATGATACTGAAGATTATATTAATATTCAACTTGACAGCCATCGTAATCAGCTGATTCAGTTAGAGCTCTTTCTTAGCTCTGGAACTATTTGTCTCTCTATTTTCGCTTTGGTGACTTCTATATTTGGCGTCAATATTCCATATGATTGGAACCAGAACCATAGTTACATGTTCAAATGGGTAGTTCTTACCACAGGATTCTTTGTAACTTTGTTGTTTGTCATGATTACGGCCTATGCTCGCAAAAAGGGATTAGTTGGATCGTGA 1173 0.4254 MAQDGSVAPADPGAMTVVKKKTQSSRSWILFDATGQGSLLDVDKYAIMHRVQIHARDLRILDPLLSYPSTILGREKAIVLNLEHIKAIITAEEVLLRDPTDENVIPVVEELQRRLTRLGAGLQLQGHGKEYLGGQNDAEPAEEDESFFEFRALEIALEAICSFLAARTAELEMAAYPALDELTSKISSRNLDKVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKTGSASPVSGSGVVNWFAASPTIGSKISKASQATGRLDEHDVEELEMLLEAYFSEIDHTLNKLTTLREYIDDTEDYINIQLDSHRNQLIQLELFLSSGTICLSIFALVTSIFGVNIPYDWNQNHSYMFKWVVLTTGFFVTLLFVMITAYARKKGLVGS 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00341 390 Coils Coil 194 221 - -
Spst10g00341 390 Gene3D - 14 99 - -
Spst10g00341 390 Gene3D Magnesium transport protein CorA, transmembrane region 103 320 - -
Spst10g00341 390 Pfam CorA-like Mg2+ transporter protein 272 378 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Spst10g00341 390 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 16 388 IPR039204 -
Spst10g00341 390 CDD Mrs2_Mfm1p-like 28 387 IPR039204 -
Spst10g00341 390 FunFam Magnesium transporter MRS2-1 16 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00341 Spst-Chr10 3411679 3414916 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00341 1 363 MRS2 Gene Family AT5G64560 76.902 0.0 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00341 K16075 - gmx:100786817 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00341 10 3411679 3414916 Spst10g00341 10 3411679 3414916 ECH