Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00335 ATGGAACCACCATTGCAACAGCAACCACCGCCGCAGCGATCCATCACCATCCTCGGAAAATACCAGCTCACGCGCCTCCTCGGTCGCGGCAGCTTCGCGAAGGTCTACCAGGCGCGATCCCTCATCGATGGCACCGCCTGCGCCGTCAAAATCATCGACAAATCCAGAACCGTCGACGCCGGCATGGAGCCCCGCATAATCCGCGAGATCGATGCCATGCGCCGCCTTCACCACCACCCTAACATCCTTAAAATCCACGAGGTTATGGCCACGAAGACCAAGATCCACCTCATCGTGGAGCTCGCCGCTGGCGGCGAGCTCTTCGCCAGAATCTCCCGTCGCGGCCGTTTGCCGGAATCCACGGCACGGCGGTACTTCCAGCAACTGGTGTCCGCGCTCCGGTTCTGCCACCGCAACGGCGTGGCTCACCGGGACCTCAAGCCGCAGAACCTCCTCCTCGACGGCGAAGGCAACCTCAAGGTCTCCGATTTCGGCCTCTCCGCACTGCCGGAGCATCTCAGGAACGGCCTTCTCCACACCGCATGCGGTACGCCGGCGTACACAGCGCCGGAAATCCTCCGGCAGAACGGTGGCTACGATGGGTCGAAGGCCGACGCCTGGTCCTGCGGCCTCATCCTCTACGTGTTCCTCGCCGGCTACCTTCCGTTTGACGACACGAACATTCCGGCGATGTGCAAGAGGATTTGCCGGCGAGATTACCAGTTCCCTGACTGGATAACAAAACCAGCTCGTTATGTTATATATAAATTACTCGACCCGAATCCGGAAACCCGAATGAGCCTGGAAAGCCTGTTTGGGAACTCGTGGTTCAAGAAATCATTAAAACCGGAAACGGCGGAGGAGAGCGCGTATGGATGGGATAACGTTTATGAGAAGGGTTGTTACTACGAAGGGGTTAAGTGTTCAGGTGTGAACGCGTTTGATATAATATCGATGTCTTCGGGTTTGGATTTAACGAGGTTGTTCGAAACGACGTCGGATGAGGGAAGCAGGAGGGAGAAGAAATTCACTTCGAGTGCGCGCGTGGAGGAGGTGGAGGAGAAGGTTAAGGAAGTGGGTGGGGATTTGGGGTTTAAGGTTGAGGCTGGAAAAACCATTAACGGTGCAATTGCATTGTTGAAAGGGAAGGTGGCTTTGGTCTTTGAGTTGCTTCAGATTGTGCCCGATCAGCTTCTTTTGGTGGCTGTCAAGGTCGTGGAGGGTGGGTTAGAGTTTGAGAAGGATCATTGGGGGAATTGGAAAAATGCCTTGCAAGATCTCGTTCTTTCTTGGCACAACGATGAACCCTGA 1311 0.5561 MEPPLQQQPPPQRSITILGKYQLTRLLGRGSFAKVYQARSLIDGTACAVKIIDKSRTVDAGMEPRIIREIDAMRRLHHHPNILKIHEVMATKTKIHLIVELAAGGELFARISRRGRLPESTARRYFQQLVSALRFCHRNGVAHRDLKPQNLLLDGEGNLKVSDFGLSALPEHLRNGLLHTACGTPAYTAPEILRQNGGYDGSKADAWSCGLILYVFLAGYLPFDDTNIPAMCKRICRRDYQFPDWITKPARYVIYKLLDPNPETRMSLESLFGNSWFKKSLKPETAEESAYGWDNVYEKGCYYEGVKCSGVNAFDIISMSSGLDLTRLFETTSDEGSRREKKFTSSARVEEVEEKVKEVGGDLGFKVEAGKTINGAIALLKGKVALVFELLQIVPDQLLLVAVKVVEGGLEFEKDHWGNWKNALQDLVLSWHNDEP 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00335 436 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
Spst10g00335 436 Pfam Protein kinase domain 21 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00335 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Spst10g00335 436 CDD CIPK_C 312 425 - -
Spst10g00335 436 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Spst10g00335 436 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 15 372 - -
Spst10g00335 436 ProSiteProfiles Protein kinase domain profile. 21 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00335 436 Gene3D Transferase(Phosphotransferase) domain 1 12 309 - -
Spst10g00335 436 Gene3D Kinase associated domain 1, KA1 310 429 - -
Spst10g00335 436 SUPERFAMILY Protein kinase-like (PK-like) 17 284 IPR011009 -
Spst10g00335 436 Pfam NAF domain 311 368 IPR004041 GO:0007165
Spst10g00335 436 SMART serkin_6 21 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00335 436 FunFam Non-specific serine/threonine protein kinase 11 300 - -
Spst10g00335 436 FunFam Non-specific serine/threonine protein kinase 14 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00335 Spst-Chr10 3325527 3326837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00335 1 433 CBL-interacting serine-threonine protein kinases AT4G14580 57.569 1.73e-171 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Spst10g00335 Pkinase 4.8e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00335 K12761 - gmx:100811834 726.472