Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00311 ATGGCGTTTTCAGTGCTGCTACTTTTGTTTTCTCTTGCGTTGTTGTTCTCAAACCCAACGTGGGTGAGTGGTAGTGGAGAGCTAAGAGCACTGATGGATTTGAAGGCCAGTTTGGATCCGGAGAGCCTTTATCTACCATCTTGGACTATCAATGGTGACCCATGTGATGGATCTTTTGAAGGAGTGGCATGCAATGAGAGGGGTCAGGTGGCAAATGTTTCTCTGCAGGGAAAGGGTCTCTCAGGGAAGCTCTCACCAGCCATTGCTGGGCTCAAGCACCTGACCGGACTCTACTTGCATTATAACTCTTTGTATGGAGAGATACCGAGAGGGATTGCAAACTTGACTCAGCTTGTTGATTTGTATTTGAATGTAAATAATCTATCTGGGGAAATCCCACGTGATTTAGCCAGCATGGAGAACTTGCAAGTTTTGCAGCTTTGTTATAATCACTTGACTGGAAGCATTCCTACACAGCTTGGTGCTTTGAAAAAGCTGAGTGTTGTTGCTTTGCAGTCAAACCAGTTAACTGGTGCTATCCCTGCTAGTCTAGGTGATTTGGGCATGCTGGCGAGGCTGGATTTGAGCTCTAATAATCTCTTTGGTTCCATTCCCACTAGCCTAGCTGAAGCTCCTTCTTTGAGAGTTTTGGATGTTCACAACAATACCCTTTCTGGGAATGTACCTCCTGCTCTAAAGAGACTAGATGATGGATTTCTGTATGAATACAATCTGGGGTTGTGTGGAGTCGGGTTTTCATCCTTGAAAGCTTGCAACGCTTCAGATCATGTTGTTTCTGGCAGACCTGAGCCTTATGGAGCAGCCACCAGAGATATCCCTGAAACTGCAAATGTGAAGTTACCTTGCAATGGTTCTCAGTGCCTTAATTCATCAAAATCCAATCAATCCACATCAGTTACTGTTGGTATATTTGTGGTTATAATTGCAATGTCTGCAATTGGTATTTTGACATTCACATTATATCGTCGGAGAAAACAAAAGCTGGGAGGTTCTTTTCTTACTAGTGACAACCGTCAGAGTACTGATGAGGCCATGGGTATATATAGGAAAAGTGGATCTCCTTTGGTCAGCCTTGAGTACTCTACCGGATGGGACCCTTTGGCCCACAGTAGGAATTTCACTGGATGTAGCCAAGATATGTTCCAGAGTTTGAGGTTCAACTTGGAAGAAGTGGAGTCGGCTACTCAGTATTTCTCAGAGTTGAATCTGTTGGGGAAGAATAGCTTTAGTGCAACATATAGAGGAGTTTTAAGGGATGGATCCGTTGTTGCTGTGAAGAGCATAAGCAAAACTAGTTGCAAGTCGGATGAAGCTGAGTTTATGAAGGGACTAAGCATGTTGACCTCATTGAGGAATGATAATGTAGTGAGGTTGAGAGGATTTTGTTGTTCAAGGGGACGAGGTGAATGCTTTCTGATTTATGATTTTGTTTCCAATGGAAACCTTTCACGCTTCCTTGATGTTAAGGAAGGAGATGGACAAGTCCTTGAATGGTCAAGTAGAGTTTCTATTGTGAAAGGAATTGCTAAAGGTATGGCATATTTACATGCATGCAAAGCAAACAAACCCGTTTTGGTTCACCAAAACATCTCAGCTGACAAAATTCTCATTGATCAGCGGTACAATCCATTGTTGGCAGATTCTTGCCTGTACAAGCTACTTACTAACGATATTGTCTTCTCTGCGCTGAAGGGTAGTGCAGCAAAGGGTTACCTGGCTCCTGAATATGCCACTACTGGTCGGTTGGCTCAGACAAGTGATGTCTTTGCTTTTGGGGTGCTGCTTTTCCAGATCCTTTCAGGGAAGCAAGAGATCACTAGCTCAATAAGGCTTGCTGCAGAGTCCTCCAAGTTCCCAGAATTTATGGACCCAAATCTTCATGGAAGATACTTCGAATATGAAGCAGCTAAACTGGCAAAAATAGCTTTGCTTTGCTCCCATGAGTCTCCTTTCGAGAGGCCATCCATGGAAGCCATTGTTCAAGAACTGGGGAATTGTAGTAGCTGCCTCTGA 2034 0.4381 MAFSVLLLLFSLALLFSNPTWVSGSGELRALMDLKASLDPESLYLPSWTINGDPCDGSFEGVACNERGQVANVSLQGKGLSGKLSPAIAGLKHLTGLYLHYNSLYGEIPRGIANLTQLVDLYLNVNNLSGEIPRDLASMENLQVLQLCYNHLTGSIPTQLGALKKLSVVALQSNQLTGAIPASLGDLGMLARLDLSSNNLFGSIPTSLAEAPSLRVLDVHNNTLSGNVPPALKRLDDGFLYEYNLGLCGVGFSSLKACNASDHVVSGRPEPYGAATRDIPETANVKLPCNGSQCLNSSKSNQSTSVTVGIFVVIIAMSAIGILTFTLYRRRKQKLGGSFLTSDNRQSTDEAMGIYRKSGSPLVSLEYSTGWDPLAHSRNFTGCSQDMFQSLRFNLEEVESATQYFSELNLLGKNSFSATYRGVLRDGSVVAVKSISKTSCKSDEAEFMKGLSMLTSLRNDNVVRLRGFCCSRGRGECFLIYDFVSNGNLSRFLDVKEGDGQVLEWSSRVSIVKGIAKGMAYLHACKANKPVLVHQNISADKILIDQRYNPLLADSCLYKLLTNDIVFSALKGSAAKGYLAPEYATTGRLAQTSDVFAFGVLLFQILSGKQEITSSIRLAAESSKFPEFMDPNLHGRYFEYEAAKLAKIALLCSHESPFERPSMEAIVQELGNCSSCL 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00311 677 FunFam Protein NSP-INTERACTING KINASE 2 137 259 - -
Spst10g00311 677 FunFam Leucine-rich repeat receptor-like kinase 26 135 - -
Spst10g00311 677 FunFam Protein NSP-INTERACTING KINASE 2 484 674 - -
Spst10g00311 677 Gene3D Ribonuclease Inhibitor 174 267 IPR032675 -
Spst10g00311 677 Pfam Protein tyrosine and serine/threonine kinase 409 670 IPR001245 GO:0004672|GO:0006468
Spst10g00311 677 Gene3D Phosphorylase Kinase; domain 1 373 483 - -
Spst10g00311 677 Gene3D Transferase(Phosphotransferase) domain 1 484 676 - -
Spst10g00311 677 FunFam Protein NSP-INTERACTING KINASE 2 376 483 - -
Spst10g00311 677 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Spst10g00311 677 SUPERFAMILY Protein kinase-like (PK-like) 385 670 IPR011009 -
Spst10g00311 677 Gene3D Ribonuclease Inhibitor 25 173 IPR032675 -
Spst10g00311 677 ProSiteProfiles Protein kinase domain profile. 405 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00311 677 Pfam Leucine rich repeat 141 200 IPR001611 GO:0005515
Spst10g00311 677 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 74 671 - -
Spst10g00311 677 SUPERFAMILY L domain-like 27 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00311 Spst-Chr10 3124279 3127012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00311 8 518 Miscellaneous Gene Families AT4G22730 55.619 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Spst10g00311 PK_Tyr_Ser-Thr 3.9e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00311 - - gmx:100775422 1206.43