Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00310 ATGGCTTCTCTGGCGGCTTCCACCGCGGCTATGTCAGAAATGCTTGGAAACCCTGTGAGCCTGAGAGGCGCCACCAGGTCTGCTCCATCTCCATCTACACCCGCTTCCTTCAAGATTGTTTCTCTTTTCTCCAAGAAGAAGGCAGCGCCACCTCCTCCAAAGAAAAAGGCTGCTGCTGTGTCCCCCGCCAATGGGGAACTTGCCAAGTGGTATGGTCCTGACAGAAGGATCTTCTTGCCAGAGGGTCTCTTGGACCGATCAGAGATCCCCGAATACTTGACAGGAGAAGTGCCTGGAGATTATGGTTATGACCCGTTTGGTCTTAGCAAGAAGCCAGAGGACTTCGCCAAATACCAGGCGTTTGAGTTGATTCATGCCAGATGGGCAATGCTTGGTGCTGCTGGATTCATCATTCCTGAGGCCTTCAACAAATACGGAGCTAACTGCGGTCCTGAGGCTGTTTGGTTCAAGACCGGAGCTTTACTTCTTGATGGGGGTACCTTGAACTACTTCGGGAAACCTATCCCCATCAATCTTATTGTTGCTGTTATTGCTGAGATAGTTCTTGTGGGTGGTGCTGAGTATTACAGAATTATCAATGGCCTGGATTTCGAAGACAAGCTTCACCCAGGTGGTCCATTCGACCCATTGGGGCTAGCAAAGGATCCAGACCAAGCTGCAATTCTAAAGGTGAAGGAAATTAAGAATGGTAGACTTGCTATGTTTGCAATGCTTGGTTTCTACTTCCAAGCTTATGTCACTGGAGAAGGTCCAGTTGAGAACTTAGCAAAACATCTTAGTGACCCTTTTGCTAACAACTTGCTCACTGTGCTTGCTGGGTCAGCTGAGAGGGCTCCAACTCTGTAA 867 0.4902 MASLAASTAAMSEMLGNPVSLRGATRSAPSPSTPASFKIVSLFSKKKAAPPPPKKKAAAVSPANGELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLIVAVIAEIVLVGGAEYYRIINGLDFEDKLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVLAGSAERAPTL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00310 288 FunFam Chlorophyll a-b binding protein, chloroplastic 77 288 - -
Spst10g00310 288 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 27 277 IPR001344 GO:0009765|GO:0016020
Spst10g00310 288 SUPERFAMILY Chlorophyll a-b binding protein 69 279 - -
Spst10g00310 288 Gene3D Chlorophyll a/b binding protein domain 77 288 - -
Spst10g00310 288 Pfam Chlorophyll A-B binding protein 90 251 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00310 Spst-Chr10 3117356 3119654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00310 1 288 Chloroplast and Mitochondria Gene Families AT4G10340 78.893 6.29e-150 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00310 K08916 - gmx:100817348 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00310 10 3117356 3119654 Spst10g00310 10 3117356 3119654 ECH
Spst4g03044 4 69806490 69808861 Spst10g00310 10 3117356 3119654 PCT