Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00298 ATGGGTTCAATGAATTACCAAGAAGCAATTGAGCTCTTTGAAGGCCAAAATATCTTGTACATGCAGATATTTGGCCACCTTAAACCTTTGTGTCTTAAATGGGCTGTCCAACTAGGTATTCCAGACATAATAAACAATCATGGTAAACCTATCACTCTTCCTCACTTGGTTTCAGCTTTGCAAATTGCTCCATCCAAGGCTGATTTTGTGCACCGCTTGATGCGCTTCTTGGCCCACAATGGAATCTTTGATATCCATCAGAGCCAAGCAGATCATGATCTAACATTTTCTCTGACCCCTGCATCAAAGCTTTTGGTCACTGGCAGTGGTTATTGTTTGTCTCCAATGGTTCTATTGAATACTGATCCACTTCTCATGAGTAAATACCATCATTTGGGGGAATGGATTCGTGGGGAGGACCCCACACTGTATGAGACTGCCTTAGGGACAAGTATTTGGGGACTTATTGACGGAGAACCTAAATACTTGAGTCTCTTCAGTGAGGGCATGGCAAGTGATTCCCAAATGGTTGACTTGGCTCTCAAAAATTGTTCTTCAGTTTTTGAGAACCTAGATTCCATCGTGGATGTAGGTGGTGGAACTGGAACCACAGCCAGAATTATCAGCAACGCATATCCTAAGTTGAAATGTGTTGTGCTTGACCTTCCTCAGGTTATACCAAACTTCACAGGAACCAATAATCTAAGTTTTGTTGGTGGTGACATGTTCAAATCTATCCCTCAAGCTGATGCAATCCTACTAAAGTGGGTTTTACATGATTGGAATGACGAAAGCTGCATAAAGATCTTGCAAAATTGTAAAGATTCAATTTCAGGGAAAGGCAATAGAGGGAAAGTGATTATCATAGAAACTGTAATAAATGAGAAGCTTGATTGCGAAGACATGACTCAAACAAAGCTTGGTTTGGATATAAGTATGTTAGCCATCAATGGAAAAGAGCGAACCGAGGAAGAATGGAAACAACTCTTCATTGAAGCAGGATTCAAAGACTACAAAATATTTCCCATTTTTGGTTTTAGATCTCTTATCGAGGTCTATCCTTAG 1065 0.4038 MGSMNYQEAIELFEGQNILYMQIFGHLKPLCLKWAVQLGIPDIINNHGKPITLPHLVSALQIAPSKADFVHRLMRFLAHNGIFDIHQSQADHDLTFSLTPASKLLVTGSGYCLSPMVLLNTDPLLMSKYHHLGEWIRGEDPTLYETALGTSIWGLIDGEPKYLSLFSEGMASDSQMVDLALKNCSSVFENLDSIVDVGGGTGTTARIISNAYPKLKCVVLDLPQVIPNFTGTNNLSFVGGDMFKSIPQADAILLKWVLHDWNDESCIKILQNCKDSISGKGNRGKVIIIETVINEKLDCEDMTQTKLGLDISMLAINGKERTEEEWKQLFIEAGFKDYKIFPIFGFRSLIEVYP 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00298 354 Pfam O-methyltransferase domain 129 336 IPR001077 GO:0008171
Spst10g00298 354 FunFam Coniferyl alcohol 9-O-methyltransferase 2 105 - -
Spst10g00298 354 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Spst10g00298 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 353 IPR029063 -
Spst10g00298 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Spst10g00298 354 CDD AdoMet_MTases 194 293 - -
Spst10g00298 354 FunFam O-methyltransferase ZRP4 107 354 - -
Spst10g00298 354 PANTHER O-METHYLTRANSFERASE 23 339 IPR016461 GO:0008168
Spst10g00298 354 SUPERFAMILY "Winged helix" DNA-binding domain 11 109 IPR036390 -
Spst10g00298 354 Gene3D - 2 105 IPR036388 -
Spst10g00298 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 354 IPR016461 GO:0008168
Spst10g00298 354 Gene3D Vaccinia Virus protein VP39 108 354 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00298 Spst-Chr10 3023823 3024957 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00298 29 340 Monolignol Biosynthesis Gene Families AT5G54160 34.062 1.03e-53 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00298 K22588 - gmx:100819853 567.385