Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst10g00289 | ATGAAGCTTGATGATACTAAGCTGGTTATTTGGGTCAAATCTGCATTTTATAAGGAATCTGGACTTCAGTTTGAGAATAATTGTGAAGTTGGAGTCTTCTCAAAACTTACCAATGCCTATTGTTTGGTTGCTATTGGAGGTTCCGAAAACTTCTACAGTGCATTTGAGAGTGAGTTAGCAGATGTTATCCCTGTGGTCAAGACCTCCATTGGTGGCACCCGTATTGTTGGTCGGCTTTGCGTTGGAAACAAGAATGGCCTTCTCTTGCCTCATACCACAACAGACCAAGAGCTTCAACATTTGAGAAACAGTCTACCTGATCAAGTTGTTGTTCAGCGTATAGAAGAAAGATTATCCGCACTGGGAAATTGTATAGCATGTAATGACCATGTGGCCCTCACCCATACTGATCTTGACAAGGAAACTGAGGAGATGATTGCTGATGTTCTTGGAGTAGAAGTTTTCAGGCAAACTATTGCTGGTAATATTCTTGTTGGCAGTTTCTGTGCATTCTCCAACAGGGGCGGTTTGGTCCACCCTCATACTTCCATCGAAGACTTGGATGAACTTTCTACTCTTCTTCAGGTTCCTTTGGTTGCTGGGACTGTCAATCGTGGTAGTGAAGTTATAGCTGCCGGCATGACAGTAAATGATTGGACAGCATTTTGTGGTTCAGACACCACAGCAACAGAGCTTTCTGTGATCGAGAGTGTTTTCAAGCTGAGAGAAGCCCAACCCAGTGCCATTGTCGATGAGATGAGGAAATCACTCGTGGATACTTACGTCTAA | 789 | 0.4347 | MKLDDTKLVIWVKSAFYKESGLQFENNCEVGVFSKLTNAYCLVAIGGSENFYSAFESELADVIPVVKTSIGGTRIVGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDKETEEMIADVLGVEVFRQTIAGNILVGSFCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLREAQPSAIVDEMRKSLVDTYV | 262 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst10g00289 | 262 | CDD | IF6 | 22 | 240 | IPR002769 | GO:0042256|GO:0043022 | |
Spst10g00289 | 262 | FunFam | Eukaryotic translation initiation factor 6 | 19 | 242 | - | - | |
Spst10g00289 | 262 | Gene3D | - | 20 | 242 | - | - | |
Spst10g00289 | 262 | SUPERFAMILY | Pentein | 22 | 241 | - | - | |
Spst10g00289 | 262 | Pfam | eIF-6 family | 22 | 220 | IPR002769 | GO:0042256|GO:0043022 | |
Spst10g00289 | 262 | SMART | eIF6neu2 | 20 | 221 | IPR002769 | GO:0042256|GO:0043022 | |
Spst10g00289 | 262 | Hamap | Translation initiation factor 6 [eif6]. | 7 | 262 | IPR002769 | GO:0042256|GO:0043022 | |
Spst10g00289 | 262 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 6 | 22 | 261 | IPR002769 | GO:0042256|GO:0043022 | |
Spst10g00289 | 262 | PIRSF | Transl_init_IF-6 | 19 | 243 | IPR002769 | GO:0042256|GO:0043022 | |
Spst10g00289 | 262 | NCBIfam | translation initiation factor IF-6 | 23 | 241 | IPR002769 | GO:0042256|GO:0043022 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst10g00289 | Spst-Chr10 | 2887893 | 2891635 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst10g00289 | 22 | 262 | Eukaryotic Initiation Factors Gene Family | AT3G55620 | 92.116 | 1.73e-171 | 471 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst10g00289 | K03264 | - | gmx:100777602 | 470.7 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst4g03002 | 4 | 69489560 | 69491952 | Spst10g00289 | 10 | 2887893 | 2891635 | PCT |