Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00266 ATGGTCAATCTTTTAAGTCACAACAGAATGGTAGTGTTTTTCTTGCTTACATTGGTTCAAATCCAAGCCAAGGTGTTGTGCTACCAATACAAAGTTGGAGATCTAGATGCTTGGGGGATACCCACTTCAAATTCAAAAGTCTACACAAATTGGTCCAAATATCACAATCTCACAATTGGAGATTCCCTTTTGTTTCTATACCCACCAAGCCAAGATTCAGTGATTCAAGTTACTGAGGAATCCTACATGAAGTGCAACATTAAAGACCCTATATTGTACATGAACAATGGCAACTCTTTGTTTAACATTACATCAAAGGGCCAATTCTACTTCACTAGTGGTGTGGCTGGCCATTGCCAAAAAAATCAAAAGCTTCATATAGCTGTGGGTGAAGGAATAGTAGAAAATACGGGTACAGCACCTGGTCCAGGTTCATCATTGCCTGCATCTGCACCCTCCTATCCCACAGTATTTGGCAATATTCCAGTAGCTCCTTCTACCTCAACCCCGGCCTCAACCTCATCTCAGTTCACTTCAACTTCTCAACTTCTCATCACTGGATTTGTTGTATCTGCACTCTTTTCAACCTTAATCTGA 597 0.4087 MVNLLSHNRMVVFFLLTLVQIQAKVLCYQYKVGDLDAWGIPTSNSKVYTNWSKYHNLTIGDSLLFLYPPSQDSVIQVTEESYMKCNIKDPILYMNNGNSLFNITSKGQFYFTSGVAGHCQKNQKLHIAVGEGIVENTGTAPGPGSSLPASAPSYPTVFGNIPVAPSTSTPASTSSQFTSTSQLLITGFVVSALFSTLI 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00266 198 FunFam Early nodulin-like protein 1 27 133 - -
Spst10g00266 198 Pfam Plastocyanin-like domain 43 122 IPR003245 GO:0009055
Spst10g00266 198 ProSiteProfiles Phytocyanin domain profile. 28 131 IPR003245 GO:0009055
Spst10g00266 198 SUPERFAMILY Cupredoxins 27 129 IPR008972 -
Spst10g00266 198 Gene3D - 28 140 IPR008972 -
Spst10g00266 198 PANTHER BLUE COPPER PROTEIN 26 164 IPR039391 GO:0009055
Spst10g00266 198 CDD OsENODL1_like 28 129 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00266 Spst-Chr10 2634610 2635307 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00266 5 163 Phytocyanin Superfamily AT1G64640 54.037 2.62e-52 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00266 - - gmx:100527517 291.967