Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00259 ATGAAAGGGGGGCGATCGCACCGCCCTCAGAGCTCCGACCCGCCGGACGAATGGGTGGATGGGTCGTGGACGGTGGACTGCATATGTGGTGTGACGTTCGACGACGGCGAGGAGATGGTGAAGTGCGACGAGTGCGGCGTATGGGTCCACACACGCTGCTCGCGGTACGTGAAGGGCGACGACACCTTCGCATGCGACAAGTGCAAGGCCAGACACAACAACAACACCAACACCGAGGAGACCGAGGTGGCGCAATTCCTCGTGGAACTCCCTACCAAAACCATCACTATGGATAACAAAAAGGCTCTCCACTCTCGGCCCAGGCTCTGGACCTATAAGCCCATCCAGGACCGGGTCCACATCCAGGGTCCACCTGGGGGCGACCCTTCCATCTTTTCTGGCACCTCCGCCTCCTCGATTTTCACGCCCCACCTCTGGAAGGCCTGCGGGTACGTTCCCAAGAAGTTTAATTTTCAGTACAAGGAGTTTCCCTTCTGGAATGATGACGATGATGATAAGGATAACGTCAATGAGGGTTTACAAGCACAAACACCAGCACAACCACAGGCACAGGATAATGACGAGAATGGTGCTGGTAGTGGGCCTCTTATTTCTTTGTCTAAAGACGGTGATAATGGTGCTGCTCCTGTCTTTGACTATTCCTCTGTTAATGTTGATGCGAGATCTGGCAACGCCAAGGAAAAGGAAACGGGCAAGATTGGGAGCGAGGATGTGCCGCCTCGTGTTCACAGTGAGGTGAAGAAGGAGAGGACTCTGCTAAGACCTCCTGTTGTTCATAACAGTAAGCGGAACAAAGGGGATTTCGGGTCTTCGAATTCAAAGGACCGGAGCGGGAAGAAGCGCGTTAGGACCTCTTCTGACAGAGAGGTGGATCCCAGGAGAAGAACTCTGCATTCTTCTAAATCAGTGTTTACATCCACTGGTGATGCAAAACAATTGGACTTTTATGACGACAGAGGAGCGAAGATTTTCAAGGCTGATACACGGAGCATGAAGAATAAAAACTTAACAGACATCATGGTTCAAGAACGTGTTTCTGATGATTATTTAGCTGTGGATACTATCATGGAGGAGCCAAATAATAACTTAACCATTACGGAGGACTCTTCAGAACCATTATATCCTGACATGACTAGACATGGTGTTTCTGTTGGAGATGTATTAGCCGAAGAGAAGCCTATTCATAAACCTCCTATTGTGGTTGAGATGTCTTCTAAGACTGATGATGCTGTTACATCGGCTTTAAAGCAGAATAATGTTGGAAATACTTCAGCGAAAGAAAAGGGTGGAGATTGCTCAGTAGCTGATAATGCAGATGATACTTTAGTAGTAAGAAGTGCTGCAAGTCCTCAAACAGAAGGTCATTGTGGTTCTGCACCAGAACCTGTGGACAACCAAGTTTCTCAAGATCTTGACCATAACATGCGTACAACCTCTACGAAATGCAAAGTTAAGATGAAGAGAGAAGACGAAGTTGACAATTTTAGGAAGCCCTCCATTTTTCATCCTTCTCCTATCAATGATCTTAAAAACAATGAAAAACCATCTGATCAGACATTTGATGTTAAAGTGAATGATGCGCCAGTTCCTAGTTTACCATCATCTGAAAATAAGGTCGGTGGTGTTGACATTTCATCAGAATTAATCCCTTCTGATCATACCAATAAACCCAATGAATTATCTGGTGATCTTTGTCATAGAAAACAAGAACTGGAGGGGTCTGAAGGTTCCTTGGAAACACAGAAGGGATTTTCAGAAACAAAAGATGGTTCAGAGTCTGCTAAAGATCCATCAAAATCTGAAGCACTTGGATGTCCGCCTAAAGTGCTTGTTGAAAAGTCATCTCCAACTTCGTCAACCATGAACTCCAAATCATTGGGTCATGACATTAAATCTGAAGATACTGAAACTGCTAATCCTTTTACGAAGCATGGAATGATGGCTGATTGTAATGTGCATATAAAGAATGAAAATTGTACAAGTAATGTTGCCAGGGATGAAAATCCAAAGAAGTCTGTAAGAGAGCGACCAAAATCATCCTTGAATTCCAATTCAAAAGGATTGCATTCAAGCAGGAGTGTGCATAATTCTGTCTCCAAGCAAGTGAATTCGGATGCAAGAGATTCTATTCATGTATCTTCAAAATCTTTGATACATCAGACTGCAAGTATTGTAGGCTCTAGTGAGTCTAATGCATCACAGCACAGTCAGAAGGTTCTACAAGTGCAGAATAAGATTTCATCTTCAGCATCACAGAAAGTTGAAAAACCTAACCAAACAAACATCGCCACTTCCTCTAAGTTGAACCATGGTCATGCACAGTCAGTGAATCCTTCTCCTATATCAAATTCTTCAATGCTGAGTGATGAAGAGCTTGCTCTGCTATTGCATCAAGAACTGAACAGTTCGCCTCGTGTACCCCGTGTACCCAGAGCACGCCATGCAGGTAGCTTGCCCCAGTTGACTTCTGCTAGTGCTACAAGCATGCTAATGAAGCGCACATCGGGTGGAGGAAAGGATCATTATTTGGTATCTAGAAGAAAACACAAGGATGCATCAAGAGATGGGTCTGGCAGTTCTCGGGAACTGGAAGATGAAGCTAAAAGGATAGAGAAGGAGAAGGGTCCCTCCTCCTCTGATCAGAGGAAACAAGATATATCATATGTGGAAGATGCTCCTGCAAGGGAAGAAGGCCTTGCATCTATGACAGCAGCAAACTCCATCACAAACAACACTGTTTCTTCCACCTCTGCAATTGCAAACAGTGATCCATCTTCCCCTCCTGAGGATCAGAATTTATCATCTGTGCGGAACTCACCTAGGAATATCTCTGATGATGATACAACAACTGCTGGAAGGCCAGTTCATCGCACCTTACCTGGTTTAATCAATGATATTATTATTATGAGCAAAGGCAGACGTATGACATATGAGGAACTCTGTAATGCTGTGCTACCGCACTGGCACAACTTGAGGAAACATAATGGAGAGCGTTACGCATACTCAAGTCACTCCCAGGCTGTTCTTGATTGTTTGAGGAACAGGCAAGAATGGGCAAGGTTGGTTGATCGTGGTCCAAAGACTAATTCTAATAGGAAAAGGCGTAAGGAGGCTGAAGAATCTGATGATAATGGATATGGCAAGGGAAGAACTGCAAAAGAGGCTGAAGGGAAGAACTTTGAGTTGCAAAAGGAAGAGTTCCCTAAAGGCAAGCGTAAAGCTCGGAAACGCAGACGCCTTGCTCTTCAGGGAAGAGCTGTGAAGGATGTCAGGAGGAGACAAAAAACTGACTCGCAAACTGATGAGGATGTTGGTCCATTCTCCAATTCTAGTGAAGAGAGCATGTTCAGTGAAGATGAAATTCAGGTTGGCAGAATATGCCCCGCGGGCAGTACATCAGATGAGGCAGGTAGTGCCTAA 3441 0.451 MKGGRSHRPQSSDPPDEWVDGSWTVDCICGVTFDDGEEMVKCDECGVWVHTRCSRYVKGDDTFACDKCKARHNNNTNTEETEVAQFLVELPTKTITMDNKKALHSRPRLWTYKPIQDRVHIQGPPGGDPSIFSGTSASSIFTPHLWKACGYVPKKFNFQYKEFPFWNDDDDDKDNVNEGLQAQTPAQPQAQDNDENGAGSGPLISLSKDGDNGAAPVFDYSSVNVDARSGNAKEKETGKIGSEDVPPRVHSEVKKERTLLRPPVVHNSKRNKGDFGSSNSKDRSGKKRVRTSSDREVDPRRRTLHSSKSVFTSTGDAKQLDFYDDRGAKIFKADTRSMKNKNLTDIMVQERVSDDYLAVDTIMEEPNNNLTITEDSSEPLYPDMTRHGVSVGDVLAEEKPIHKPPIVVEMSSKTDDAVTSALKQNNVGNTSAKEKGGDCSVADNADDTLVVRSAASPQTEGHCGSAPEPVDNQVSQDLDHNMRTTSTKCKVKMKREDEVDNFRKPSIFHPSPINDLKNNEKPSDQTFDVKVNDAPVPSLPSSENKVGGVDISSELIPSDHTNKPNELSGDLCHRKQELEGSEGSLETQKGFSETKDGSESAKDPSKSEALGCPPKVLVEKSSPTSSTMNSKSLGHDIKSEDTETANPFTKHGMMADCNVHIKNENCTSNVARDENPKKSVRERPKSSLNSNSKGLHSSRSVHNSVSKQVNSDARDSIHVSSKSLIHQTASIVGSSESNASQHSQKVLQVQNKISSSASQKVEKPNQTNIATSSKLNHGHAQSVNPSPISNSSMLSDEELALLLHQELNSSPRVPRVPRARHAGSLPQLTSASATSMLMKRTSGGGKDHYLVSRRKHKDASRDGSGSSRELEDEAKRIEKEKGPSSSDQRKQDISYVEDAPAREEGLASMTAANSITNNTVSSTSAIANSDPSSPPEDQNLSSVRNSPRNISDDDTTTAGRPVHRTLPGLINDIIIMSKGRRMTYEELCNAVLPHWHNLRKHNGERYAYSSHSQAVLDCLRNRQEWARLVDRGPKTNSNRKRRKEAEESDDNGYGKGRTAKEAEGKNFELQKEEFPKGKRKARKRRRLALQGRAVKDVRRRQKTDSQTDEDVGPFSNSSEESMFSEDEIQVGRICPAGSTSDEAGSA 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00259 1146 MobiDBLite consensus disorder prediction 922 956 - -
Spst10g00259 1146 MobiDBLite consensus disorder prediction 275 305 - -
Spst10g00259 1146 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 77 IPR013083 -
Spst10g00259 1146 MobiDBLite consensus disorder prediction 619 633 - -
Spst10g00259 1146 MobiDBLite consensus disorder prediction 454 649 - -
Spst10g00259 1146 MobiDBLite consensus disorder prediction 229 263 - -
Spst10g00259 1146 MobiDBLite consensus disorder prediction 662 720 - -
Spst10g00259 1146 MobiDBLite consensus disorder prediction 1029 1146 - -
Spst10g00259 1146 MobiDBLite consensus disorder prediction 1029 1076 - -
Spst10g00259 1146 MobiDBLite consensus disorder prediction 229 311 - -
Spst10g00259 1146 MobiDBLite consensus disorder prediction 922 963 - -
Spst10g00259 1146 MobiDBLite consensus disorder prediction 846 895 - -
Spst10g00259 1146 MobiDBLite consensus disorder prediction 811 895 - -
Spst10g00259 1146 PANTHER UNCHARACTERIZED 1 1138 - -
Spst10g00259 1146 MobiDBLite consensus disorder prediction 825 839 - -
Spst10g00259 1146 MobiDBLite consensus disorder prediction 735 791 - -
Spst10g00259 1146 MobiDBLite consensus disorder prediction 1108 1124 - -
Spst10g00259 1146 MobiDBLite consensus disorder prediction 483 504 - -
Spst10g00259 1146 MobiDBLite consensus disorder prediction 685 720 - -
Spst10g00259 1146 MobiDBLite consensus disorder prediction 1090 1107 - -
Spst10g00259 1146 SMART PHD_3 26 69 IPR001965 -
Spst10g00259 1146 MobiDBLite consensus disorder prediction 566 582 - -
Spst10g00259 1146 MobiDBLite consensus disorder prediction 184 200 - -
Spst10g00259 1146 MobiDBLite consensus disorder prediction 184 210 - -
Spst10g00259 1146 SUPERFAMILY FYVE/PHD zinc finger 15 73 IPR011011 -
Spst10g00259 1146 ProSitePatterns Zinc finger PHD-type signature. 27 68 IPR019786 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00259 25 68 PHD Transcription Factor Family AT5G22260 44.681 3.25e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00259 - - gmx:100810855 1827.37