Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00248 ATGGATCCGAGAGGTTTAGTAATGTTAGTGGCGATTCTAGTTGCGGAAATTGGTTGTGTTGCTAACGGAAATTTAGTGTTCCCGGTGGAGCGTCGGAAAAGGAGTTTAAGCGCTATCAAAGCTCACGATGCTCGCCGTCGAGGTCGAATTCTCTCCGCCGTGGATCTCAACCTTGGCGGCAATGGTCTCCCTACTAAGACTGGTCTGTATTATACAAAACTTGGGCTTGGCTCTCCTCCGAAGGATTATTATGTGCAAGTTGATACAGGAAGTGATATTATGTGGGTGAATTGTGTTCAGTGCTCGAGATGTCCCAGGAAAAGTGATCTCGGTATAGATTTGACTCTTTATGACCCAAAGAAATCTGGAACTTCACAGCTGGTTTCTTGTGACCAAGATTTTTGCTTTGCCGCGTTTGATGGTCCAATTCCTGGGTGCAAGTCTGAAATTCCATGCCCCTACAGTATAACTTACGGAGATGGAAGTGCAACTTCTGGATACTATGTCCAGGATTATCTTACGTATAACCGTGTCAACGGAAATCTTCGTACTACACCACAAAATAGCAGCATCATTTTTGGGTGTGGTGCTGCACAATCTGGGACATTGGGTTCATCTACTGAAGAAGCCCTTGATGGAATAATTGGTTTTGGACAAGCAAATTCTTCTTTGCTGTCACAGCTTGCTGCATCCGGAAAGGTGAAAAAAATATTTTCACATTGCCTTGACAATATTCGTGGTGGTGGAATATTTGCCATAGGGGAATTGGTGGAACCAAAAGTCAGCACAACTCCATTGGTACCGAAAATGGCACACTATAACGTGGTTTTGAAGAGTATTGAGGTAGATACAGATACTCTACAGCTTCCCTCAGATATATTTGATTCGGGAAATGGGAGGGGGACAGTAATAGATAGTGGAACAACCTTGGCTTATCTTCCTGCCTTAGTTTATGACGAACTGATTCCAAAGGTTTTGGCCCGGCAGCCTGGACTGAAATTATATCTTGTTGACCAACAATTTAGTTGTTTTCAGTATGCTGGAAATGTTGATCGTGGATTTCCAGTTGTCAAGTTTCATTTTGAGGATTCTCTTTCTCTGACAGTTTATCCTCACGACTACCTGTTTGAGTTTAATGGTGGTATCCGGTGTATTGGCTGGCAGAAGAGTGCGGCACAGACCAAGAATGGAAAGGATATGACCCTTCTTGGAGATTTGGTGCTATCAAACAAACTAGTGGTATATGATCTTGAAAATATGGCCATTGGATGGACTGACTACAATTGCTCTTCGAGCATTAAAGTGAAGGATGAAGCAACTGGAGAATCTTTTGGGGTGGCATTGGGCACCATGACATTCAGTCCTGAATTGGACATTTGTACTAATGAAAGTGATGAGTATGTTGTGGTAGCTGTATCACAGTATTCAATTACAAAAGCTTCATTGGTGTCCAGTGTTGCATTAGCCAAATCCCAGCTTTCACTTTCACCAGTGTCCTCTGCCATGGAAAACAATGGCCACCATCATCATCACACCAACCAAATCTCAACCTCCAACTCTCATGGTTTCTCTTCCAAACCCAGTTGCAGTAAGCAGAAAATGGTTCTTGATTTCGATTTAAATGAACCCATAATCGATTCAATGGCTTCTTCTCCTCTCATCGACATCAATTTGGTTCCAATTTCTCAGGTTTCTGCTGATAATTTCCTGGTGGCAAAGGATGGGTGCCAAACTCTTGCTCCAACATTGGATTTGTTGCCTGCTCCTCCAACACAAGTTGTTGAACAAGTGCATTCATCCAATTCCAATGATGACATAACAGTGAAGTTTCCATTTGATCTTAATGCTAAACTTGATGAGGAGGATTCAATTTCTTGCACTGAGGAAGCACCTCCCAAAGTAGGTGAAACCATTCCAAATTTACCTACCACTTATTTGGAGGTCACGCGACAAGATGTTCCTCCTACAAACATGGACAGTGAAGATAGAGCAAGTGCTGTCGAGGGAAGAACAGCAACATCTGAAAGCAGGAAGAGAAAGAGATTTATCGAAGAATATGAGAGAGGGAATGGGAGATCTTTTCGCGGGAAAACATCGACTGTGAATGTTGAAAGCCGAAGAAAGACCATTGTGGACGATGGTTATCGTTGGCGAAAATATGGCCAGAAAACTATAAAGGGAAATTCGTTCCCCAGGGCCTACTACAAATGCACAAGTCCTGGGTGTTCTGTAAGGAAGCACGTGGAACGAGATTCTCGCAACAAAAAGAATGTGATCACTACTTATGAGGGAAAACACAATCATGAACAACCACCCCCTAAGATCCCTAATGAGAAACAATGCGCAGATGATGAAGAAGTTGAAGATGAAGAAGAAGCGAGAGAAGAACTTGCTACTGCTGCAACCAATGCTCTTTTGAATTTTCAATTACCTGCGAGTAGGAATTTTCTCAACACCCCACACACTGCACAACCTCGACTTCAAACTCTTCAGCTACTTCCTAATGACACAAATCCTGGATTTGCCATTACTAGGTCAGTGTGGCCTAACCCTTTTGGAAGTTTCAGCAATAACATGAACATTGGATCTTCCTCTTACACCCCTCAAATGCACTATTATTCTTTCTTCAATAATACCAATACCATGCCTTACGGTTCCTATGGACTTACCCTCAACCGTTATGCTGTCCCTCAACCTGAGTTTCCAATGCCACCACCCTTTATCATTCCTTCTTCTTCTCAAGTTTTTTCTCAGGCTATGCTTAACGCAAATGGGTCCAGTTCAGTGTTTCCTTTAAGGGAAATAGGTGCAAGATATCGCAGCTGGTATTAG 2832 0.4276 MDPRGLVMLVAILVAEIGCVANGNLVFPVERRKRSLSAIKAHDARRRGRILSAVDLNLGGNGLPTKTGLYYTKLGLGSPPKDYYVQVDTGSDIMWVNCVQCSRCPRKSDLGIDLTLYDPKKSGTSQLVSCDQDFCFAAFDGPIPGCKSEIPCPYSITYGDGSATSGYYVQDYLTYNRVNGNLRTTPQNSSIIFGCGAAQSGTLGSSTEEALDGIIGFGQANSSLLSQLAASGKVKKIFSHCLDNIRGGGIFAIGELVEPKVSTTPLVPKMAHYNVVLKSIEVDTDTLQLPSDIFDSGNGRGTVIDSGTTLAYLPALVYDELIPKVLARQPGLKLYLVDQQFSCFQYAGNVDRGFPVVKFHFEDSLSLTVYPHDYLFEFNGGIRCIGWQKSAAQTKNGKDMTLLGDLVLSNKLVVYDLENMAIGWTDYNCSSSIKVKDEATGESFGVALGTMTFSPELDICTNESDEYVVVAVSQYSITKASLVSSVALAKSQLSLSPVSSAMENNGHHHHHTNQISTSNSHGFSSKPSCSKQKMVLDFDLNEPIIDSMASSPLIDINLVPISQVSADNFLVAKDGCQTLAPTLDLLPAPPTQVVEQVHSSNSNDDITVKFPFDLNAKLDEEDSISCTEEAPPKVGETIPNLPTTYLEVTRQDVPPTNMDSEDRASAVEGRTATSESRKRKRFIEEYERGNGRSFRGKTSTVNVESRRKTIVDDGYRWRKYGQKTIKGNSFPRAYYKCTSPGCSVRKHVERDSRNKKNVITTYEGKHNHEQPPPKIPNEKQCADDEEVEDEEEAREELATAATNALLNFQLPASRNFLNTPHTAQPRLQTLQLLPNDTNPGFAITRSVWPNPFGSFSNNMNIGSSSYTPQMHYYSFFNNTNTMPYGSYGLTLNRYAVPQPEFPMPPPFIIPSSSQVFSQAMLNANGSSSVFPLREIGARYRSWY 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00248 943 Pfam WRKY DNA -binding domain 712 769 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst10g00248 943 Gene3D WRKY domain 696 772 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst10g00248 943 PRINTS Pepsin (A1) aspartic protease family signature 76 96 IPR001461 GO:0004190|GO:0006508
Spst10g00248 943 PRINTS Pepsin (A1) aspartic protease family signature 302 313 IPR001461 GO:0004190|GO:0006508
Spst10g00248 943 PRINTS Pepsin (A1) aspartic protease family signature 401 416 IPR001461 GO:0004190|GO:0006508
Spst10g00248 943 MobiDBLite consensus disorder prediction 652 676 - -
Spst10g00248 943 Pfam Xylanase inhibitor C-terminal 272 425 IPR032799 -
Spst10g00248 943 Gene3D Acid Proteases 61 255 IPR021109 -
Spst10g00248 943 MobiDBLite consensus disorder prediction 762 788 - -
Spst10g00248 943 MobiDBLite consensus disorder prediction 762 781 - -
Spst10g00248 943 Pfam Xylanase inhibitor N-terminal 70 254 IPR032861 -
Spst10g00248 943 SUPERFAMILY Acid proteases 64 433 IPR021109 -
Spst10g00248 943 FunFam Eukaryotic aspartyl protease family protein 255 436 - -
Spst10g00248 943 ProSiteProfiles Peptidase family A1 domain profile. 70 425 IPR033121 -
Spst10g00248 943 ProSiteProfiles WRKY domain profile. 706 771 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst10g00248 943 MobiDBLite consensus disorder prediction 511 528 - -
Spst10g00248 943 MobiDBLite consensus disorder prediction 499 528 - -
Spst10g00248 943 SMART WRKY_cls 711 770 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst10g00248 943 FunFam Eukaryotic aspartyl protease family protein 60 254 - -
Spst10g00248 943 Gene3D Acid Proteases 256 435 IPR021109 -
Spst10g00248 943 FunFam WRKY transcription factor 698 772 - -
Spst10g00248 943 PANTHER ASPARTYL PROTEASES 24 423 IPR001461 GO:0004190|GO:0006508
Spst10g00248 943 CDD pepsin_A_like_plant 70 429 IPR034161 -
Spst10g00248 943 SUPERFAMILY WRKY DNA-binding domain 708 771 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00248 Spst-Chr10 2396883 2411288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00248 52 430 Miscellaneous Gene Families AT1G44130 26.847 5.26e-29 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst10g00248 TAXi_N 2.4e-39 CL0129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00248 - - gmx:100804123 814.298