Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst10g00247 | ATGTTGGAGAAGCTTAACCACACCATGTCTTCTTCCATTCAAAACAATCACCATCACATCAATGAAACCACACCACCATCCAATTCTGCAGAAAAGGGTTTTCATGGTTTCTCTGCGAAGGAGACAAAGGGTTTGGATTTGGATTTGAATGAACCAGTAATCAATACAAACCCTGAGACTTCTCTTACTTTGGTTCCAATTTCTCAGGTTTCTGCTGATGATAATTGTGTTGTGGCAATGGGAGGGTGTCAACCTTTTGCTCCTGAGTTGGATGTGTCACATGCTCCTCCAACACAAGTTGTTGAGCAAGTGCATTCATCCAATTCCAATGATGAGAAAATGGTGAAGTTTCCTTTTGATCTTAATGCAAATTTTGATGAGGAGGATCAAATTTCTTCCTCCAATGAAGCACATGCCAAAGATGGTGGTGGGAGTGAAGCCATTCAACCTTTACCTTCCTCTCATTTGGAGGTCACTGTAGAAGATGTTCTTCCTACAGACAATGATAGTGAAGATAGAGGCAGTGCTGTTGGGGGAGGATCAAACAGTTCTCAGACAAGGAAGAGAAAGAAATCCGTTGAGGAATCTGAGAAAGGGAGAGGGAAGGCTTTTCGTAGAGAAAATGTGGAAGTGAAGATTAAGAGACAAAAAGAGAATACAGTAGATGATGGATATCACTGGAGAAAGTATGGTCAAAAGCCTATTAAGGGAAACTTATTCCCTAGGTATAGTGCTCTCTCTCTCCTCACTCCTTTCATGTCCAAGGCCTACTACAGATGCACAAGTGCTGGGTGTTCTGTAAAGAAGCACGTGGAACGTGATTCGCACAACCAAAAGAATTTGATTACTACTTATGAGGGAAGACACAATCATGAACAACCAGCCTTCAGGAACCCTAGCAAACAATATGTAGAAGATGATGACGAAAATGACGAAGATGAAGAAGATGAAGAACTTGCTGCTGTTGCTGCAGCCAATACTCTATTGACTTTTGGGATGCCTAGGAATTTTTTGAATGTCCCAAACCTTGCAGAACCTCGAGTTCACACTCTTCAACTACTTCCCAATAACACAAATCCTGAATTTTTCAATAGGTTCATGAGACCCAACCATTTTGGAAGTTTCAACAATAATATGAATATTGGGTCTTCCTCATACACTCCCCAAATGCATTATTCTTCATTCTTGAATAACACCAATACCATGGCATACCAATCCTATGGAATTAACCTTGACCGTTATGTTGCCCCTCAACCTAGGTTTTCAATTCCACCACCATTTAACATGCCTTCTTCTTTTGGAGGTTTCCCTCAGGATAGGGTTAATGCTAATGGGTCCAGTTCAATGTGTCCTTTCAGAGAAACAGGTGCAAGAGATGGTAGGTGGAACTAG | 1392 | 0.4131 | MLEKLNHTMSSSIQNNHHHINETTPPSNSAEKGFHGFSAKETKGLDLDLNEPVINTNPETSLTLVPISQVSADDNCVVAMGGCQPFAPELDVSHAPPTQVVEQVHSSNSNDEKMVKFPFDLNANFDEEDQISSSNEAHAKDGGGSEAIQPLPSSHLEVTVEDVLPTDNDSEDRGSAVGGGSNSSQTRKRKKSVEESEKGRGKAFRRENVEVKIKRQKENTVDDGYHWRKYGQKPIKGNLFPRYSALSLLTPFMSKAYYRCTSAGCSVKKHVERDSHNQKNLITTYEGRHNHEQPAFRNPSKQYVEDDDENDEDEEDEELAAVAAANTLLTFGMPRNFLNVPNLAEPRVHTLQLLPNNTNPEFFNRFMRPNHFGSFNNNMNIGSSSYTPQMHYSSFLNNTNTMAYQSYGINLDRYVAPQPRFSIPPPFNMPSSFGGFPQDRVNANGSSSMCPFRETGARDGRWN | 463 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst10g00247 | 463 | Gene3D | WRKY domain | 206 | 295 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Spst10g00247 | 463 | ProSiteProfiles | WRKY domain profile. | 216 | 294 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Spst10g00247 | 463 | SMART | WRKY_cls | 221 | 293 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Spst10g00247 | 463 | MobiDBLite | consensus disorder prediction | 130 | 208 | - | - | |
Spst10g00247 | 463 | MobiDBLite | consensus disorder prediction | 285 | 314 | - | - | |
Spst10g00247 | 463 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Spst10g00247 | 463 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 97 | 310 | IPR044810 | GO:0003700 | |
Spst10g00247 | 463 | Pfam | WRKY DNA -binding domain | 222 | 292 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Spst10g00247 | 463 | SUPERFAMILY | WRKY DNA-binding domain | 217 | 294 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Spst10g00247 | 463 | MobiDBLite | consensus disorder prediction | 187 | 208 | - | - | |
Spst10g00247 | 463 | MobiDBLite | consensus disorder prediction | 444 | 463 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst10g00247 | Spst-Chr10 | 2389307 | 2392746 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst10g00247 | 134 | 297 | WRKY Transcription Factor Family | AT5G56270 | 37.079 | 2.55e-24 | 104 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Spst10g00247 | WRKY | 1.9e-17 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst10g00247 | K18835 | - | var:108323080 | 444.506 |