Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00246 ATGGTGGAGGAGGGCATTTATCGCTCCAGTTTCCCTCGATCTTCAAATTTCTCTTTTCTAGAAACTCTGAATCTTCGATCCCTCGTATACTTGTGCCCCGAACCTTATCCACAACAAAATCTAGAGTTTCTTCAATCGCAAAATATTCAATTCTTCCACTTTGGTATTCAAGGCAAGACGGATCTTTCTGTGCCTGTCGTTAAGGATTTGATCTTGGAGGCCGTCAAAGTTTTAATTGACGTGAGAAATCACCCTGTTTTAATCCACTGCAATCAAGGAAAGCATCGAACTGGTTGCGTCGTTGGATGCTTCAGAAAATTGCAGAGTTGGTGTTTATCTTCTGTGTTTGAGGAGTACAAGCTATTTGCTGGTGCTAAATTCAGAACAACAGATTTAAAGTTCTTAGAAACGTGA 414 0.4058 MVEEGIYRSSFPRSSNFSFLETLNLRSLVYLCPEPYPQQNLEFLQSQNIQFFHFGIQGKTDLSVPVVKDLILEAVKVLIDVRNHPVLIHCNQGKHRTGCVVGCFRKLQSWCLSSVFEEYKLFAGAKFRTTDLKFLET 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00246 137 PANTHER TYROSINE-PROTEIN PHOSPHATASE 1 137 - -
Spst10g00246 137 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 2 134 IPR029021 -
Spst10g00246 137 PRINTS Plant and fungal dual specificity phosphatase signature 66 80 IPR020428 GO:0016791
Spst10g00246 137 PRINTS Plant and fungal dual specificity phosphatase signature 30 43 IPR020428 GO:0016791
Spst10g00246 137 PRINTS Plant and fungal dual specificity phosphatase signature 49 63 IPR020428 GO:0016791
Spst10g00246 137 Pfam Tyrosine phosphatase family 1 136 IPR004861 -
Spst10g00246 137 ProSiteProfiles Dual specificity protein phosphatase domain profile. 1 137 IPR020422 GO:0006470|GO:0008138
Spst10g00246 137 FunFam Tyrosine phosphatase, putative 1 137 - -
Spst10g00246 137 ProSitePatterns Tyrosine specific protein phosphatases active site. 88 98 IPR016130 GO:0016311|GO:0016791
Spst10g00246 137 Gene3D Protein tyrosine phosphatase superfamily 1 137 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00246 Spst-Chr10 2385598 2388657 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00246 1 137 Protein tyrosine phosphatase (PTP) family AT3G02800 67.153 1.96e-72 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00246 K18045 - gmx:100808199 251.136