Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00226 ATGGAGATTGTATTCTTGTTTCTCCACTCCCAATTAAGCCAAGGTCTTATTGACGACATGAGCATATCTTACTCTGTTAGAAGCATGAATTGTTTCCCTTGTTGTGCACCTAAGAAAGGCCAAAGCAAGAGGGAGCTTGGTTCTCCACCCCCGGAACCAGAACCGGTTACAACAGTAGAGTCACCCGCTGAAGTGAAGAAACAAAAGCCTGAGGAACCAATGCCACCAGCTGCTGCCGCAACAACTACAACTGCTCAAGCTTTCACATTCCGTGAGCTAGCAACGGCAACAAAGAATTTCCGACAGGAATGCCTCTTGGATGAAGGAGGTTATGGCAGAATATACAAAGGGACAATTCCTACCACCGGCAAGAATGTGGCCGTGATGCAACTCGACCGAAATGGGATGCAAGGCAAAGAGGAATTCCTGGCTGATGTTACAGAACTAAATGCCTTGCAGCATGAAAATCTGGTCAGTCTCATTGGTTATTGTGCCGATGGAGATCAACGTCTTTTGGTGTACGAGTATTTCTCCGGGCGCACTCTAGAAGAGCGTCTTTTTGAGAATAAAGCGGATGAAGGAACATTAAGTTGGTTTGACAGAATGAAAATAGTAGCGGCTGCTTCTAAAGGACTAGAGTACTTGCACGAGAGTGCGAACCCCCCAGTTATATTCAGGGACATGAAAGCGTCGAGCATCTTGGTGGACAATGATTTCAATGCCAAACTACGTGATTTTGGAATAGGAAAGCTTTCTGGTGGAGACAAGATGAGCAATGGACCTCCAAGAATTATGGGTAGCTATGGTTACTGTGCTCCGGAGTACGTAAAAGGAGGTCAAGTCAACCTGAAATCTGACGTATACAGTTTCGGAGTTGTCTTGCTAGAGCTCATTACTGGACGAAGAGCCGTTGACACCACAAAACCAAATGAAGAGCAAAATCTCGTTCCATGGGCAACACCCTTATTCAGGGATCCGAAAAGATATCCAGAAATGGCAGATCCTCTTCTTAATATGAATTTCCCAGCAAAGGATCTGAATCAAGTTGTTGCAATAGCATCCATGTGCTTACAGGAGGAAGCAGACGCTCGTCCTTTGATCAGTGACGTTGTAACTGCTCTAAGTTTCCTTTCCACTCCACCTGCTCCTCCCCCAAAGAGTAGTGCTGGTGAAGGCGAAGGTGGATCAGTATCTAGAAAGGGGAGTCGTAAATCATCCAGCAGTAGGAAATCGGGTGAGTTAAGCCAGAAGAGCAGCAAAAAATCTTCACTGAAGGAGTTAAGCCAGAAGAGCAGCAAAAAGTCTTCCTCCAAAGATTCAAGCAAGAAAAGCAGCAGCAGAAAATCTTCCATCAGAGATTTAGGCAAGAGCAGTAAAAAATCTTCTGGCAGAGTTTCAAGCCATAAGAGTAGCAAAGAATCGGACGATGGAAGCGTTTCCTCAAGCTGCCGTAGCAGCAGCGTGGCATCAGAAGATGAAAGGTCTCTGTCAGGGCGAAGCAGCATGAGGCTATCAACAGGAAGTGATCATAGCTCCAGCAGAAGGTCAGAAGATGAGAGCCGTCACTTAGTTGAACGTGCATGCAGCGTTGGATCTTCTGGTTGTTTACGCAACCGATCATTAGCACCTGTACGGAAACCCTCCCTTCCCCACTTTCTCTTACCTTTTTGCTCCCGACTTATTCTTTCTGCCTTCGGTTTCACACACCTCCACAAAATGGATGAATGGAAGAGAGACGCACACATTCCAGCGTTTGGGAACTGGGATTTCACCAATGAGTTCCCCATCACTCGCTATTTCGAGTGTGCCACACAGCCCCGTCCACTTCGTTACACTTCTTCCTCCGCTGAAACTCGTCTCCGTAGCAATCCTCGTGCCCTTCGAAATTATAGCAAACAGGATACGAGGAACAAGGGAAGGAGGTGCCAGCATGTTAATGCCAACAGAGGAAGAGTGTACGACGTAAGTGAACAGTCAAAGAAGCCAAATGGAATAAAGAAGCACAGGCAGGTGCACGACACCGTTCCACGAACTACAAAACCCGTTGACGAAGATCTCTATAAGATCCCTCCCGAACTACTCCATACTTCCAACAAACGGAAGAAAATTATGGGGTTCATTTCCAAGTGTCTTGTACTGCTTGTGTGTCATGAGCATTGCTGA 2163 0.4646 MEIVFLFLHSQLSQGLIDDMSISYSVRSMNCFPCCAPKKGQSKRELGSPPPEPEPVTTVESPAEVKKQKPEEPMPPAAAATTTTAQAFTFRELATATKNFRQECLLDEGGYGRIYKGTIPTTGKNVAVMQLDRNGMQGKEEFLADVTELNALQHENLVSLIGYCADGDQRLLVYEYFSGRTLEERLFENKADEGTLSWFDRMKIVAAASKGLEYLHESANPPVIFRDMKASSILVDNDFNAKLRDFGIGKLSGGDKMSNGPPRIMGSYGYCAPEYVKGGQVNLKSDVYSFGVVLLELITGRRAVDTTKPNEEQNLVPWATPLFRDPKRYPEMADPLLNMNFPAKDLNQVVAIASMCLQEEADARPLISDVVTALSFLSTPPAPPPKSSAGEGEGGSVSRKGSRKSSSSRKSGELSQKSSKKSSLKELSQKSSKKSSSKDSSKKSSSRKSSIRDLGKSSKKSSGRVSSHKSSKESDDGSVSSSCRSSSVASEDERSLSGRSSMRLSTGSDHSSSRRSEDESRHLVERACSVGSSGCLRNRSLAPVRKPSLPHFLLPFCSRLILSAFGFTHLHKMDEWKRDAHIPAFGNWDFTNEFPITRYFECATQPRPLRYTSSSAETRLRSNPRALRNYSKQDTRNKGRRCQHVNANRGRVYDVSEQSKKPNGIKKHRQVHDTVPRTTKPVDEDLYKIPPELLHTSNKRKKIMGFISKCLVLLVCHEHC 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00226 720 Gene3D Transferase(Phosphotransferase) domain 1 178 380 - -
Spst10g00226 720 MobiDBLite consensus disorder prediction 378 521 - -
Spst10g00226 720 MobiDBLite consensus disorder prediction 476 509 - -
Spst10g00226 720 MobiDBLite consensus disorder prediction 654 673 - -
Spst10g00226 720 MobiDBLite consensus disorder prediction 414 459 - -
Spst10g00226 720 FunFam serine/threonine-protein kinase PBS1-like 65 176 - -
Spst10g00226 720 SUPERFAMILY Protein kinase-like (PK-like) 82 378 IPR011009 -
Spst10g00226 720 MobiDBLite consensus disorder prediction 40 82 - -
Spst10g00226 720 Gene3D Phosphorylase Kinase; domain 1 72 176 - -
Spst10g00226 720 ProSiteProfiles Protein kinase domain profile. 100 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00226 720 FunFam Serine/threonine-protein kinase PBS1 177 390 - -
Spst10g00226 720 Pfam Protein kinase domain 106 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00226 720 PANTHER OS07G0668900 PROTEIN 31 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00226 Spst-Chr10 2224734 2235955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00226 29 381 Glycoside Hydrolase AT3G07070 55.679 6.92e-137 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Spst10g00226 Pkinase 3.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00226 - - pvu:PHAVU_007G115500g 524.628