Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00215 ATGGCTTCTCTCTCTTGCTCCCCCGACGACCTGGCTCCACTCATCAACCACACCGCCGCCGCCAACTACCTCTGTAACCAGTTCGATTCCATTTCGAGAAAGCTCAACGACACCACCTACGCGGTCGACAACACCTACCTTCTTTTCTCCGCGTATCTGGTCTTCGCCATGCAGCTTGGTTTCGCCATGCTCTGCGCCGGCTCCGTCCGAGCCAAGAACACCATGAACATCATGCTCACCAACGTCCTCGACGCCGCCGCAGGTGGCCTCTCCTACTACCTCTTCGGCTTCGCTTTCGCCTTCGGTGGCCCTTCCAACGGCTTCATCGGCCGCCACTTCTTTGGCCTTAGAGATTACCCCATTCCCACCGGCGACTATAGCTTCTTCCTATACCAGTGGGCTTTCGCCATCGCCGCCGCCGGAATCACCAGCGGCTCCATCGCGGAGAGAACGCAATTCGTTGCTTATCTCATTTACTCTTCTTTTTTAACCGGGTTCGTTTACCCCATCGTTTCGCATTGGTTCTGGTCCGCGGACGGTTGGGCCAGCGCGACGCGAAGCGACGGGAAAGTCTTGTTCGGGTCCGGAGTCATCGACTTTGCGGGCTCCGGCGTGGTTCACATGGTTGGTGGCATAGCGGGCCTGTGGGGGGCTTTAATTGAAGGCCCGAGAATCGGGCGGTTCGACCGGACGGGCCGGTCTGTTGCATTGCGCGGGCACAGCGCCTCGTTGGTTGTGTTGGGTTCGTTTCTGTTATGGTTCGGGTGGTACGGGTTCAACCCCGGTTCGTTTTTTACCATAGCGAAGGGGTATGGGGGCTCGGGGTATTATGGTCAGTGGAGTGCGATAGGGAGGACAGCTGTCACCACGACATTGGCCGGGAGCACGGCGGCTCTGACGACGTTGTTCAGCAAGCGGTTATTGGTGGGCCATTGGAACGTTACGGACGTGTGTAACGGCCTGCTCGGCGGGTTCGCTGCCATCACCTCGGGCTGTGCGGTTGTGGAGCCGTGGGCAGCGATAGTGTGTGGGTTTGTGGCCGCGTGGGTTTTGATCGGGCTTAATAAGCTGGCAACGAAAGTGGAGTACGATGACCCTTTGGAGGCGGCGCAACTTCACGGCGGGTGTGGCGCGTGGGGGGTGTTGTTCACGGGGTTGTTTGCGAAGAGGGAGTACGTGGAGGAGATTTATGGAATTGGGAGGCCGTGCGGGGCGTTGATGGGTGGCGGCGGGAAGTTGGTGGCGGCGCAGGTGATTCAGATAGTGGTGGTGTGTGGGTGGGTTACGGCGACGATGGCGCCGTTGTTCTACGGTCTTCATAAGATGAATCTGTTGAGGATATCGAGGGATGATGAAACTGCAGGCATGGATTTGACGAGGCATGGTGGGTTTGCTTATGCTTATCATGACGATGAAGATGATTCGAGCAGGGGCGTAGGATTGATGATGCGTAAGATAGAACCTGCTAGTGCTTCTCCCTCTCCCCCCGCTGCACCACAAGTGTGA 1506 0.5784 MASLSCSPDDLAPLINHTAAANYLCNQFDSISRKLNDTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGGPSNGFIGRHFFGLRDYPIPTGDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWFWSADGWASATRSDGKVLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRTGRSVALRGHSASLVVLGSFLLWFGWYGFNPGSFFTIAKGYGGSGYYGQWSAIGRTAVTTTLAGSTAALTTLFSKRLLVGHWNVTDVCNGLLGGFAAITSGCAVVEPWAAIVCGFVAAWVLIGLNKLATKVEYDDPLEAAQLHGGCGAWGVLFTGLFAKREYVEEIYGIGRPCGALMGGGGKLVAAQVIQIVVVCGWVTATMAPLFYGLHKMNLLRISRDDETAGMDLTRHGGFAYAYHDDEDDSSRGVGLMMRKIEPASASPSPPAAPQV 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00215 501 Gene3D Ammonium transporter AmtB like domains 20 484 IPR029020 -
Spst10g00215 501 Pfam Ammonium Transporter Family 46 466 IPR024041 GO:0008519|GO:0016020|GO:0072488
Spst10g00215 501 NCBIfam ammonium transporter 43 466 IPR001905 GO:0008519|GO:0016020|GO:0072488
Spst10g00215 501 SUPERFAMILY Ammonium transporter 40 447 - -
Spst10g00215 501 PANTHER AMMONIUM TRANSPORTER 16 462 - -
Spst10g00215 501 ProSitePatterns Ammonium transporters signature. 199 224 IPR018047 GO:0008519|GO:0016020|GO:0072488
Spst10g00215 501 FunFam Ammonium transporter 24 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00215 Spst-Chr10 2105073 2106578 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00215 22 495 Inorganic Solute Cotransporters AT1G64780 80.962 0.0 784
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00215 K03320 K07573 gmx:100797209 876.7