Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00205 ATGAGGTGTACTCGACTTGAAGGCGAGTTATTGAGCTCAATGCGAGCAGAGTTGGCATCTTTGTCATCTCAACCTTCCGTCCCCGCACGAGCGGCATCCCCGATTCATGTCAGCACAAAGGAGAGTTGTGATGCTCCTGATAGAGGGGCAGAGGTTGCTCCTACTGACACTGCTGACCGTCGGTTGTATGTTGCGGGTCCTCCCGAGCATTTGGTGGCATACTGTACGTATTATATCTTTGACATGTATTTGGTACAGGAAGAGGCTGAAAAAGCAAAGGAAGTTGTGCATGAATCACCACCACCACCATCTCGCTTTACAGCGACTCGGTGCATCGGCGACGACTATCGGGACCACTCCCATACAGTTAGATATGCCACCCGAAGTCGTATTTACATCGTTTGTGTGTTGAGAGGAAGATCCGCTATCTCTATGGATTTGTTGACCTCGTTGCCATTTAGTCCAGTTGGGAATAAAGTCGAAGAGGTGCAAACGTACTTAATAGAGGCATTTCAAAATGGGGGCAAAGAAGTCTACTTAGCACCTTACTTGCATCAGGGTCATTGGCAGCTCATAATAATTGTTCCTCGCCAATTTCTTGTGATTCTCCTGTGTTCATTACACAAGAAACCAAATGATTTGGATATTAAAAAGCACATAGACGCAGCTTTGGAAGCTCACCTAAGGTTGCAAGGTCTTCCATCTCATGCTAGAAAGAAGTTGACGTATATTGCACCAAAGTGTCCACGCCAACCGGGAAGTTATGAGTGCGGGTTTTATGTGATGAAGCACATGCACACCATTGTAGCCAAAAATATTCTTGACACGTGGAGGGAGCAAAACGACTGCGCTTCGGTAGTCGTCTCCACCGAGGCATGTTATTCGCTCACTGCCTCTACTCTTCCTATAACACTCACCATCGTATTCGCATCCAGTAGAGACGTTGACTTCGTGCTCGTTCTGGAAGGGGAACTAATGGACCAAGCACTTGTCGACGACATAATCAATCGCCTTCTCGAAGTTCGCGGCCGCCCGGGGAAGCAGGTGCAGCTGTCGGAGTCAGAGATCCGCCAGCTCTGTGCCGCTTCCCGAGAGATTTTCTTGCAGCAACCTAATTTGTTGGAGCTCGAAGCACCAATTAAGATTTGTGGTGACGTACATGGTCAATATTCTGATCTTTTAAGGCTTTTTGAATATGGTGGATTACCTCCTGAGGCCAACTACTTATTTTTGGGGGATTATGTGGATCGTGGGAAGCAGAGTTTGGAAACAATATGCCTTCTCCTAGCTTATAAAATAAAATATCCTGAGAATTTTTTTCTTTTGAGGGGTAACCATGAATGTGCTTCTATTAACCGTATATATGGATTTTATGACGAGTGTAAAAGAAGGTTCAATGTAAGGTTATGGAAGACATTTACAGAATGCTTCAATTGCTTGCCCGTGGCAGCACTCATTGATGAAAAGATATTGTGCATGCATGGGGGCCTTTCTCCTGACTTACATAATTTGGATCAGATTAGAAATCTACAACGGCCCACTGATGTCCCTGATACAGGTTTGCTTTGTGATCTCCTCTGGTCAGATCCAAGCAAAGAGGTTCAAGGTTGGGGAATGAATGACAGGGGAGTTTCATATACATTTGGTGCTGATAAGGTCTCCGAGTTTCTTCAGAAACATGATTTGGATCTTATTTGTCGTGCTCATCAGGTGGTGGAGGATGGGTATGAGTTCTTTGCTAACCGACAGCTTGTAACAATATTTTCGGCACCTAATTATTGTGGGGAGTTTGACAATGCTGGCGCTATGATGAGTGTTGATGAGACACTAATGTGCTCTTTCCAAATATTGAAGCCATCTGATAAAAAAGCAAAACTCAACAGTACTACCACTACTAAGCCAGGAAACTCTCCAGCAGGTGTAAAGTCTTTCATGGGTTCAAGAGTATGA 1950 0.4492 MRCTRLEGELLSSMRAELASLSSQPSVPARAASPIHVSTKESCDAPDRGAEVAPTDTADRRLYVAGPPEHLVAYCTYYIFDMYLVQEEAEKAKEVVHESPPPPSRFTATRCIGDDYRDHSHTVRYATRSRIYIVCVLRGRSAISMDLLTSLPFSPVGNKVEEVQTYLIEAFQNGGKEVYLAPYLHQGHWQLIIIVPRQFLVILLCSLHKKPNDLDIKKHIDAALEAHLRLQGLPSHARKKLTYIAPKCPRQPGSYECGFYVMKHMHTIVAKNILDTWREQNDCASVVVSTEACYSLTASTLPITLTIVFASSRDVDFVLVLEGELMDQALVDDIINRLLEVRGRPGKQVQLSESEIRQLCAASREIFLQQPNLLELEAPIKICGDVHGQYSDLLRLFEYGGLPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTECFNCLPVAALIDEKILCMHGGLSPDLHNLDQIRNLQRPTDVPDTGLLCDLLWSDPSKEVQGWGMNDRGVSYTFGADKVSEFLQKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKAKLNSTTTTKPGNSPAGVKSFMGSRV 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00205 649 ProSitePatterns Serine/threonine specific protein phosphatases signature. 442 447 IPR006186 GO:0016787
Spst10g00205 649 MobiDBLite consensus disorder prediction 625 649 - -
Spst10g00205 649 Pfam Calcineurin-like phosphoesterase 379 571 IPR004843 GO:0016787
Spst10g00205 649 Gene3D - 324 630 IPR029052 -
Spst10g00205 649 SUPERFAMILY Metallo-dependent phosphatases 342 625 IPR029052 -
Spst10g00205 649 Pfam Serine-threonine protein phosphatase N-terminal domain 331 377 IPR031675 -
Spst10g00205 649 CDD MPP_PP1_PPKL 331 619 - -
Spst10g00205 649 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 328 628 - -
Spst10g00205 649 SMART pp2a_7 351 621 IPR006186 GO:0016787
Spst10g00205 649 FunFam Serine/threonine-protein phosphatase 324 628 - -
Spst10g00205 649 SUPERFAMILY Cysteine proteinases 174 278 IPR038765 -
Spst10g00205 649 Gene3D Adenoviral Proteinase; Chain A 145 287 - -
Spst10g00205 649 PRINTS Serine/threonine phosphatase family signature 475 501 IPR006186 GO:0016787
Spst10g00205 649 PRINTS Serine/threonine phosphatase family signature 408 435 IPR006186 GO:0016787
Spst10g00205 649 PRINTS Serine/threonine phosphatase family signature 379 406 IPR006186 GO:0016787
Spst10g00205 649 PRINTS Serine/threonine phosphatase family signature 561 581 IPR006186 GO:0016787
Spst10g00205 649 PRINTS Serine/threonine phosphatase family signature 583 599 IPR006186 GO:0016787
Spst10g00205 649 PRINTS Serine/threonine phosphatase family signature 441 465 IPR006186 GO:0016787
Spst10g00205 649 PRINTS Serine/threonine phosphatase family signature 504 531 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00205 Spst-Chr10 2035532 2045182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00205 380 562 Calmodulin-binding Proteins AT5G63870 32.569 7.53e-27 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00205 K06269 - gmx:100799218 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00205 10 2035532 2045182 Spst10g00205 10 2035532 2045182 ECH