Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00182 ATGCAAACCCACCTGCTGTTCTTCTATTGTTACATTGGACTCACACTTGCTTCTACTGAAGCTGCAGCAGAAGATGAATTGTCAACTCTTCTCTCAATCAAATCCACTCTCATCGACCCAATGAGGCATCTGAAGGATTGGCAGTTTCCGAGCAATGTGACACAACGAGGTTCACCCCATTGTAACTGGACTGGAGTTGGTTGCAACTTTAAAGGCTTCGTAGACAGTCTTGACCTTTCCAACATGAACCTCAGCGGTCGTGTTTCGGACCACATTCAATCTCTTTCAAGTCTGTCTTTTTTCAACATAAGCTGTAACAACTTTGCTTCATCACTGCCCATATCACTGTCCAACCTCACCTCTCTCAAGAGCTTTGATGTGAGCCAGAACTACTTCACTGGTAGCTTCCCCTCTGGTCTTGGAAGAGCTGCAGGCTTGAGATCAATCAATGCATCGAGCAATGATTTTTCGGGTTTTCTTCCTGAGGATATTGGAAATGCAACATTGCTTGAGAGCCTTGATTTTCGAGGGAGCTACTTTGTGAGTTCAATCCCCAGGAGTTTTAAGAATTTGCAGAAAATCAAGTTTCTAGGCCTTTCAGGCAATAACTTCACAGGGAGGATTCCAGGATATCTGGGGGAACTAACATCTCTGGAGACACTGATTATGGGATACAATTTGTTTGAAGGTGAGATCCCTGCAGAGTTTGGCAATCTTACCAGTCTTCAATACCTTGACTTGGCTGTAGGCAGCCTCAGTGGACAAATTCCAGGTGAATTGGGTAAGCTGACAAAACTGAACACAATTTACTTGTACCAGAACAACTTCACAGGAAAAATTCCACCACAATTCGGAAACATCACCTCACTGGCGTTTTTGGATCTCTCTGACAATCAGATCGCAGGAGAGATTCCAGAAGAACTTACTAAATTGGAAAACCTGAAGCTCTTAAATCTGATGACGAACAAACTAACTGGTCCAGTACCAGAGAAGCTTGGTGAATTGAAAAATTTACAGGTGCTTGAGCTATGGAAAAATTCCTTGGATGGTCCTTTGCCACCAAACCTTGGACAGAACTCTCCTTTGCAGTGGTTGGATGTATCCTCTAACTCACTATCTGGGGATATCCCTCCAGGTTTGTGTACTTCAGGAAATCTCACTAAACTAATCCTCTTCAATAATTCTTTCACCGGTTCCATTCCAAGTGGACTTGCAAACTGTTTGTCTTTGGTACGTGTTCGGATTCAAAACAATCTTATTTCTGGAACTATTCCAGTTGGTTTTGGAAACCTCCTTGGCCTTCAACGGCTAGAATTGGCAAAGAACAACCTGACTGAGAAAATTCCCACTGATATTACCTCATCCACATCACTCTCTTTCATTGATTTATCTTGGAACCACTTTGAGTCATCTCTACCCTCAGATATTCTTTCTATTCCAACCCTTCAAACCTTCATTGCCTCTCATAACAATTTTGGAGGAAATATCCCAGATGAGTTCCAGGACTGTCCATCTCTATCAGTATTGGACCTTTCAAACACGTATATATATGGCACAATCCCTGAAAGTATTGCGTCTTGTAAAAAATTAGTCAACCTAAACCTTAGAAATAACCACTTGACAGGAGAAATCCCAAAATCAATTACAAACATGCCCACTTTATCTGTTCTTGACCTGTCCAACAATTCACTGACTGGTAGGATTCCTGAAAACATTGGCAATTGTCCTGCTCTGGAAATGCTGGACCTGTCCTATAACAAACTTGAGGGTCCAGTACCCTCAAATGGGATGTTGATGACCATAAATCCTAACGATCTTATCGGAAATGAAGGTCTTTGTGGAGGAATTCTCCCTCCATGTTCTCCAAGTATGACTGTGACAAGCCATCGAAGGAGCTCACATGTCAGATACATCATTATTGGTTTTGTGACTGGCATTTCAGTGATTTTAGCGCTTGGTGCAGCATACTTTGGTGGTAGATATTTATACAATAGATGGCCCTTATATAACAACTTCATCTATGATTGGTTCAAACAGAGCAATGAAGATTGGCCCTGGAGACTAGTAGCATTCCAGAGGATCAGTTTCACTAGTAGTGACATCCTGACTAGCATGAAGGAATCAAACGTCATAGGAATGGGGGGCACTGGTATTGTTTACAAAGCTGAAATTCATAGACCTCACGTAACTGTAGCAGTGAAGAAACTGTGGAGGTCACGGACAGACATAGAAGATGGCAATGACGTGTTGAGAGAAGTGGAACTCCTAGGGAGACTTAGGCACAGGAATATTGTAAGGCTGTTGGGGTATGTACACAACGAAAGGAAAGTGATGATGGTTTACGAGTACATGCCTAACGGGAATCTTGGAACAGCACTGCATGGTGAACAATCTGCAAGGTTGCTTGTTGACTGGGTCTCAAGGTATAACATAGCTCTTGGAGTTGCACAAGGGCTTAACTACCTCCACCATGATTGCCACCCACCAGTTATTCACAGGGATATCAAATCTAACAACATACTTCTTGACGCAAATTTAGAAGCAAGAATAGCAGATTTCGGGTTGGCAAGGATGATGATTCAAAAGAACGAGACAGTTTCCATGGTGGCTGGATCATATGGATACATCGCACCAGAATATGGGTACACTCTGAAGGTTGACGAGAAGATTGACATATACAGTTACGGGGTGGTGCTTTTGGAGCTCCTAACTGGCAAAATGCCTTTAGACCCTTCGTTTGAAGAATCAATTGACATAGTCGAATGGATAAGGAAGAAGAAAAGCAACAAAGCCTTGTTAGAAGCACTGGACCCTGCGATAGCTAGTCAGTGCAAACATGTCCAAGAAGAAATGTTGCTTGTACTCCGGATTGCACTTCTATGTACCGCAAAGCTTCCCAAGGAAAGACCACCCATGAGAGACATCATCACAATGCTTGGAGAGGCAAAGCCAAGAAGGAAAAGTGTTTGCAATAATGGGCGTCAAGACAGCAGTAGCATAGAAAAGTCAACGATATTTACCACCTCCCCAGTAGTAAGTCTTTTGTAG 3048 0.4272 MQTHLLFFYCYIGLTLASTEAAAEDELSTLLSIKSTLIDPMRHLKDWQFPSNVTQRGSPHCNWTGVGCNFKGFVDSLDLSNMNLSGRVSDHIQSLSSLSFFNISCNNFASSLPISLSNLTSLKSFDVSQNYFTGSFPSGLGRAAGLRSINASSNDFSGFLPEDIGNATLLESLDFRGSYFVSSIPRSFKNLQKIKFLGLSGNNFTGRIPGYLGELTSLETLIMGYNLFEGEIPAEFGNLTSLQYLDLAVGSLSGQIPGELGKLTKLNTIYLYQNNFTGKIPPQFGNITSLAFLDLSDNQIAGEIPEELTKLENLKLLNLMTNKLTGPVPEKLGELKNLQVLELWKNSLDGPLPPNLGQNSPLQWLDVSSNSLSGDIPPGLCTSGNLTKLILFNNSFTGSIPSGLANCLSLVRVRIQNNLISGTIPVGFGNLLGLQRLELAKNNLTEKIPTDITSSTSLSFIDLSWNHFESSLPSDILSIPTLQTFIASHNNFGGNIPDEFQDCPSLSVLDLSNTYIYGTIPESIASCKKLVNLNLRNNHLTGEIPKSITNMPTLSVLDLSNNSLTGRIPENIGNCPALEMLDLSYNKLEGPVPSNGMLMTINPNDLIGNEGLCGGILPPCSPSMTVTSHRRSSHVRYIIIGFVTGISVILALGAAYFGGRYLYNRWPLYNNFIYDWFKQSNEDWPWRLVAFQRISFTSSDILTSMKESNVIGMGGTGIVYKAEIHRPHVTVAVKKLWRSRTDIEDGNDVLREVELLGRLRHRNIVRLLGYVHNERKVMMVYEYMPNGNLGTALHGEQSARLLVDWVSRYNIALGVAQGLNYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLARMMIQKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELLTGKMPLDPSFEESIDIVEWIRKKKSNKALLEALDPAIASQCKHVQEEMLLVLRIALLCTAKLPKERPPMRDIITMLGEAKPRRKSVCNNGRQDSSSIEKSTIFTTSPVVSLL 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00182 1015 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 23 178 - -
Spst10g00182 1015 Pfam Protein kinase domain 707 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00182 1015 SUPERFAMILY Protein kinase-like (PK-like) 699 979 IPR011009 -
Spst10g00182 1015 FunFam MDIS1-interacting receptor like kinase 1 705 787 - -
Spst10g00182 1015 Gene3D Ribonuclease Inhibitor 183 277 IPR032675 -
Spst10g00182 1015 Gene3D Ribonuclease Inhibitor 380 621 IPR032675 -
Spst10g00182 1015 FunFam MDIS1-interacting receptor like kinase 1 788 998 - -
Spst10g00182 1015 Pfam Leucine rich repeat N-terminal domain 24 69 IPR013210 -
Spst10g00182 1015 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 179 279 - -
Spst10g00182 1015 SUPERFAMILY RNI-like 252 596 - -
Spst10g00182 1015 FunFam Leucine-rich repeat receptor protein kinase EMS1 280 362 - -
Spst10g00182 1015 SMART serkin_6 705 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00182 1015 SMART LRR_typ_2 551 575 IPR003591 -
Spst10g00182 1015 SMART LRR_typ_2 263 286 IPR003591 -
Spst10g00182 1015 SMART LRR_typ_2 287 311 IPR003591 -
Spst10g00182 1015 SMART LRR_typ_2 431 455 IPR003591 -
Spst10g00182 1015 SMART LRR_typ_2 335 359 IPR003591 -
Spst10g00182 1015 SMART LRR_typ_2 119 143 IPR003591 -
Spst10g00182 1015 SMART LRR_typ_2 215 238 IPR003591 -
Spst10g00182 1015 Gene3D Phosphorylase Kinase; domain 1 704 787 - -
Spst10g00182 1015 ProSitePatterns Protein kinases ATP-binding region signature. 711 735 IPR017441 GO:0005524
Spst10g00182 1015 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 170 974 - -
Spst10g00182 1015 SUPERFAMILY L domain-like 59 306 - -
Spst10g00182 1015 ProSiteProfiles Protein kinase domain profile. 705 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00182 1015 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 363 624 - -
Spst10g00182 1015 Pfam Leucine rich repeat 529 588 IPR001611 GO:0005515
Spst10g00182 1015 Pfam Leucine rich repeat 410 468 IPR001611 GO:0005515
Spst10g00182 1015 PRINTS Leucine-rich repeat signature 575 588 - -
Spst10g00182 1015 PRINTS Leucine-rich repeat signature 554 567 - -
Spst10g00182 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 830 842 IPR008271 GO:0004672|GO:0006468
Spst10g00182 1015 Gene3D Transferase(Phosphotransferase) domain 1 788 1006 - -
Spst10g00182 1015 Gene3D Ribonuclease Inhibitor 278 379 IPR032675 -
Spst10g00182 1015 Gene3D Ribonuclease Inhibitor 23 182 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00182 Spst-Chr10 1722494 1725725 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00182 4 1015 Receptor kinase-like Gene Family AT1G08590 64.472 0.0 1295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Spst10g00182 Pkinase 1.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00182 - - gmx:100793873 1823.91