LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst10g00161	ATGCACTCCCGTGCGTGTCTCTTGCTGCTGATTTGTTTCCCCGTTTTGTTAAACGCCGCACCCTCCTCTGCCAATGGTGGCAACGAGTCCTTAATCTTGGGGTGTGGGTTGGGAGGAGGTGGTGGCAAAGACACCGACGGAAGAAAATGGAGCCCCGACGACAAGTACCTTTCACGGGGAAATTCCGTCACATTCAAAGCTTCCTTCCAAGACCCTTCGCTTTTGTCCGAGGTTCCATACATGACTGCGCGAATTTTCACCTCCGAAGCAGCCTACAAATTCGCCATCCAAGGCGACAAACGTTACTGGCTCAGGCTTCATTTCTACCCCTCCGTTTACGACAACTTGGACTCTGTTAACTCTTATTTCTCCGTCAAAGCAAACGGCCTCACGCTTCTTTCCAACTTCAGCGCCTTCGTCACGTGCCAAGCCCTCTCACAAGCCTACGTTGACAGAGAGTATTCCCTTGCGCCTTTGGATTCCGACGTTCTCAACGTTACCTTCACGCCCTCTGGCAAACACAATGAAACTTTTGCTTTTGTTAATGGGATTGAGCTCATCCAAATGCCTGAGTTGTTTGACGAGGCTCCTTTGGTGGGGTACGATGGCCAAACTATGGACACCAAGAGTTTGCATTTACAGACCATGTTCAGGTTAAACGTTGGAGGACAATACATATCTCCAAATGAAGATTCTGGTCTTACCAGAATGTGGTACGATGATAGGCCTTATATTTATGGTTCTGCCACTGGTGTCACCAACCAAGCTACCAAGGATGAAAAAATCGACTATCAAAGTCTTCCAGAGTCCATTGCTCCTCCCAGTGTCTACTCCACTTCGCGATCCATGGGAGGCGATAAGAATGTCAACCTGGGCTACAATCTCACGTGGATCTTCCAAGTTGATCCGGATTCTATCTACCTTACCCGGCTGCATTTCTGTGAATATCACTATTCCAAAGTGAATCAGATTGTTTTCAAAGTCTACATCAACAACCAAACAGCAGAGACTGCTGCTGATGTGATTGGGTGGTCAGGAGGTAAAGGAATTCCAACTTACAAGGATTATGTAATGTATGCGAGAGATCAGCCAGGTGACGATAAACTCTGGCTTGCTTTGCACCCTGCGCCTGAAACAAAGCCAGAATTTTATGATGCGTTACTCAATGGGGTGGAGGTGTTCAAGCTCAATGACACAGACCTGTCTGGCCCCAATCCTCAACCTTCTGACATGCTGGTTAAATATGAGCAGAAGGAAAAGACTTTCCAAACCAAAAATCAGACTAGTAGAACATTTGTTATTGGCAGTGCTGCTGGGGGTGCTGCAGGTTTTGCTTTGGTGGCTGCAATAATTGTTGTTGTTCATCACAAGAAGAGAAAGAGAGCTCCGGGATCATACACCACCTCGTCTAACTGGTTACCTCTTTATGGTTCGCACACAGTAGGTACCAAATCCACAGGGTCAGGGAAGAGTATGGGCAGTGTCAACTTATCAGCCATGGCTCAAGGATTGTGCCGCTATTTCTCCTTACAAGAAATGAAGCAAGCAACCAAGAATTTCGATGAGTCTAATGTGATAGGGGTGGGAGGGTTTGGAAAGGTTTACAAGGGTGTTATTGATAATGGGTTCAAAGTGGCAATCAAAAGATCGAACCCGCAATCGGAACAAGGAGTGAACGAGTTCCAGACTGAGATTGAGATGCTGTCCAAGTTGAGGCACAAGCATTTGGTGTCCTTGATTGGTTTTTGCGAGGAGGGTGATGAGATGTGTCTGGTTTATGACTACATGGCTCGTGGCACCATGAGGGAACACCTTTACAAGGGAAACAAGCCATTGGACATGTTAACATGGAAGCAAAGGCTGGAGATCTGCATTGGAGCAGCAAGAGGCCTTCACTACCTTCACACGGGAGCAAAATACACCATCATTCATCGAGATGTCAAAACAACCAACATTCTCCTTGATGAAAACTGGGTTGCCAAGGTTTCAGATTTTGGACTCTCCAAAACAGGTCCAGACATGAACAAAGGTCATGTTAGTACCGTGGTGAAGGGTAGCTTTGGATACTTGGATCCCGAATATTTCAGGAGGCAACAGTTGACTGAGAAGTCTGACGTGTACTCGTTTGGGGTTGTGCTGTTTGAGGCCCTTTGCGCAAGGCCTGCTCTCAATCCTAGCCTTCCGAAGGAACAGGTAAGCCTTGCAGAATGGGCATTGTACAACAAAAGAAGAGGAACACTTGAGGACATCATTGACCCAAACATCAAAGGGAAGAGCAACCCTGAAAGCTTGATCAAGTTTGCTGATGCAGCTGAGAAGTGTGTGTCTGATCTTGGATTCGAACGACCCTCCATGAATGACCTGTTGTGGAATCTCGAATTCGCTCTAAACTTGGAGCAAAACCCCAAGGGTTCAACTGCTCCACGTGAGGACGAAGGTGAGTTCTCAGAAGTAAGCTTGACAAACAACGACGTGGCAGCTCATTACAAAAACCTTAGCCTAGGAAGCGAGCTTGAGGTTGTCCAAGACTCCACTAATGGTAGTAGCTCTCCTGTCATCTTCTCGCAAATTGGCAATCCAACAGGACGATGA	2592	0.4699	MHSRACLLLLICFPVLLNAAPSSANGGNESLILGCGLGGGGGKDTDGRKWSPDDKYLSRGNSVTFKASFQDPSLLSEVPYMTARIFTSEAAYKFAIQGDKRYWLRLHFYPSVYDNLDSVNSYFSVKANGLTLLSNFSAFVTCQALSQAYVDREYSLAPLDSDVLNVTFTPSGKHNETFAFVNGIELIQMPELFDEAPLVGYDGQTMDTKSLHLQTMFRLNVGGQYISPNEDSGLTRMWYDDRPYIYGSATGVTNQATKDEKIDYQSLPESIAPPSVYSTSRSMGGDKNVNLGYNLTWIFQVDPDSIYLTRLHFCEYHYSKVNQIVFKVYINNQTAETAADVIGWSGGKGIPTYKDYVMYARDQPGDDKLWLALHPAPETKPEFYDALLNGVEVFKLNDTDLSGPNPQPSDMLVKYEQKEKTFQTKNQTSRTFVIGSAAGGAAGFALVAAIIVVVHHKKRKRAPGSYTTSSNWLPLYGSHTVGTKSTGSGKSMGSVNLSAMAQGLCRYFSLQEMKQATKNFDESNVIGVGGFGKVYKGVIDNGFKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEGDEMCLVYDYMARGTMREHLYKGNKPLDMLTWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPDMNKGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPSLPKEQVSLAEWALYNKRRGTLEDIIDPNIKGKSNPESLIKFADAAEKCVSDLGFERPSMNDLLWNLEFALNLEQNPKGSTAPREDEGEFSEVSLTNNDVAAHYKNLSLGSELEVVQDSTNGSSSPVIFSQIGNPTGR	863

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst10g00161	863	FunFam	Receptor-like protein kinase FERONIA	596	812	-	-
	Spst10g00161	863	SUPERFAMILY	Protein kinase-like (PK-like)	495	795	IPR011009	-
	Spst10g00161	863	Gene3D	-	211	397	-	-
	Spst10g00161	863	Gene3D	-	33	190	-	-
	Spst10g00161	863	SMART	serkin_6	520	795	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Spst10g00161	863	Pfam	Malectin-like domain	34	395	IPR024788	-
	Spst10g00161	863	Gene3D	Phosphorylase Kinase; domain 1	481	595	-	-
	Spst10g00161	863	PANTHER	OS07G0166700 PROTEIN	504	799	IPR045272	GO:0004714\|GO:0006468
	Spst10g00161	863	ProSitePatterns	Protein kinases ATP-binding region signature.	526	548	IPR017441	GO:0005524
	Spst10g00161	863	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	642	654	IPR008271	GO:0004672\|GO:0006468
	Spst10g00161	863	Gene3D	Transferase(Phosphotransferase) domain 1	596	812	-	-
	Spst10g00161	863	ProSiteProfiles	Protein kinase domain profile.	520	795	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Spst10g00161	863	MobiDBLite	consensus disorder prediction	843	863	-	-
	Spst10g00161	863	FunFam	receptor-like protein kinase FERONIA	483	595	-	-
	Spst10g00161	863	FunFam	FERONIA receptor-like kinase	211	397	-	-
	Spst10g00161	863	Pfam	Protein tyrosine and serine/threonine kinase	524	719	IPR001245	GO:0004672\|GO:0006468
	Spst10g00161	863	CDD	STKc_IRAK	526	793	-	-
	Spst10g00161	863	FunFam	FERONIA receptor-like kinase	30	190	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst10g00161	Spst-Chr10	1554213	1556804	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst10g00161	11	863	Receptor kinase-like Gene Family	AT3G51550	53.311	0.0	848

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Spst10g00161		Malectin_like	4.7e-41	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst10g00161	-		-	gmx:100791236	1380.54