Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00150 ATGGATAGGGTGTTCTCAGTTGACGACTTCTGGCCATCGACGCCGATCCCCGTCTCCACCGCCGACGAGGCCTCCAAGATGAGCCGCAGTGCGTCCGAGTGGGCTTTCCAGCGCTTCATCCAGGAAGCTTCCGCACCCTCTCCCCCCGCTCCTTCCTCCGCCACCGCCGCCGCTCCTGCCGCCACTCCCGACGTAGTCTTTGTGGAGATCGACGATCATCCCAAACCTGCTCCTGCCCCTGCTCCTTCGCAGAACGCCGCCGTTTTGCCCAATGCCCCTGTTCCCGTGCCCCTTGACTCCGATCAATACCAGGCCTTCCTCAAGAACAAGCTCAACCTTGCATGCGCAGCTGTAGCCATGACTAGGGCATCTTTGGCTATATCTCAAGAGCAACCCCCGTTTTCGGATGGTGGATCACAGCCTATCGAGCCTTCTCAATCTGGATCTCAGACTACTTCTAAAGGATCCATTCCTTCTGGAAATGATCCATCTAAGTTACAAGATAAAGATACGAAAGTACCAGTTGGGATGCCTTCCATTCAAAAGAAACCAGCTGTTGCAGTTAGGCCATCAACAAGTGGATCATCAAGAGAACAGTCAGATGATGACGATGCTGAGGGAGAGACATCTATGAATGACATGGACCCTGCTGATGCAAAACGAGTAAGGAGGATGCTATCCAACAGGGAGTCTGCCCGACGCTCTAGAAGAAGAAAGCAGGCTCATTTAACCGACCTAGAAACACAGGTTTCACAATTACGAGGCGAAAATTCTACATTGTTGAAGCGCCTTACTGATGTAAGTCAGAAATACAGTGAATCTGCCGTTGACAACAGAGTTTTAAAAGCTGATGTTGAAACATTAAGAGCAAAGGTGAAGATGGCTGAAGAGTCCGTCAAAAGAATTACTGGATTGAACCCAATGGTTCATGCGATGTCTGATATATCATCATTGGGCATGCCATTATTTGATGGAAGAAGCCCTTCAGACACTTCAGCCGATGCAGCTGTTCCTGTGCAAGATGATCATCATCACTTCTATCAACCCGCATCTAATAATCCTATTCCCAGTCATGATCCGATAGTCAACAATGGGTTGGGTGGCATATCTTCAATTGAAAATGTGCAGCAGAACGCTGCAGCAGTGGTAGGTGGGAACAAGATGGGTCAAACTGCTTCGCTGCAGCGGGTAGCTAGCTTGGAACATCTTCAGAAGCGGATTCGTGGTGGTGTGGATCCCTGTGGACCTCCTTCCAATGGGGAGCATTAA 1269 0.5004 MDRVFSVDDFWPSTPIPVSTADEASKMSRSASEWAFQRFIQEASAPSPPAPSSATAAAPAATPDVVFVEIDDHPKPAPAPAPSQNAAVLPNAPVPVPLDSDQYQAFLKNKLNLACAAVAMTRASLAISQEQPPFSDGGSQPIEPSQSGSQTTSKGSIPSGNDPSKLQDKDTKVPVGMPSIQKKPAVAVRPSTSGSSREQSDDDDAEGETSMNDMDPADAKRVRRMLSNRESARRSRRRKQAHLTDLETQVSQLRGENSTLLKRLTDVSQKYSESAVDNRVLKADVETLRAKVKMAEESVKRITGLNPMVHAMSDISSLGMPLFDGRSPSDTSADAAVPVQDDHHHFYQPASNNPIPSHDPIVNNGLGGISSIENVQQNAAAVVGGNKMGQTASLQRVASLEHLQKRIRGGVDPCGPPSNGEH 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00150 422 Coils Coil 278 298 - -
Spst10g00150 422 MobiDBLite consensus disorder prediction 130 220 - -
Spst10g00150 422 Gene3D - 219 275 - -
Spst10g00150 422 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 218 273 IPR004827 GO:0003700|GO:0006355
Spst10g00150 422 SMART brlzneu 216 280 IPR004827 GO:0003700|GO:0006355
Spst10g00150 422 Pfam bZIP transcription factor 219 272 IPR004827 GO:0003700|GO:0006355
Spst10g00150 422 MobiDBLite consensus disorder prediction 130 164 - -
Spst10g00150 422 MobiDBLite consensus disorder prediction 43 92 - -
Spst10g00150 422 MobiDBLite consensus disorder prediction 1 24 - -
Spst10g00150 422 SUPERFAMILY Leucine zipper domain 220 270 IPR046347 GO:0003700|GO:0006355
Spst10g00150 422 CDD bZIP_plant_GBF1 221 272 IPR045314 GO:0003700|GO:0006355
Spst10g00150 422 PANTHER BASIC LEUCINE ZIPPER 63 1 412 - -
Spst10g00150 422 FunFam BZIP transcription factor 218 269 - -
Spst10g00150 422 Pfam Basic leucine-zipper C terminal 287 411 IPR020983 -
Spst10g00150 422 Coils Coil 236 263 - -
Spst10g00150 422 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 223 238 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00150 Spst-Chr10 1498382 1503457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00150 1 309 bZIP Transcription Factor Family AT4G02640 40.413 8.01e-48 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst10g00150 bZIP_C 5.2e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00150 K25784 - gmx:100170702 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00150 10 1498382 1503457 Spst10g00150 10 1498382 1503457 ECH
Spst6g00455 6 4226395 4230164 Spst10g00150 10 1498382 1503457 PCT