Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00141 ATGGCGGATTCTCCAAGCAACTCAAAGGAGAAGAGCACGCGCGTTTACCATCCCTATCAGGACCTCAACGTTCCAATCCAAAAGCTCTACAACCTCCCCACCGCGCCGGAGCATCTCTTTCCGGAAGAAGCCGCCAGGACCCACCGCTCCTGGGGCGACAACCTCCAGTACTACACCGGCACCGGCTACCTCTCCGGCGCAATCATCGGCGCCGCCAGAGGCACTGTCCAGGGCCTCCGCGAGGCCGAGTCCGGCGACTCCCTCAAAATCCGACTCAACCGGGTCCTCAACTCGGGCGGCCACGCGGGTCGCAAACTCGGCAACTCGCTCGGCGTCTTGGGCCTCATCTTCGCCGGGCTCGAGAGTGGGATGATCCACGCCAGGGGCACCGACGATTTCCTCAACAGCGCCGTCGCCGGACTCGGCACCGGAGCGCTCTACAGGGCCGCCGCCGGACCCCGATCCGCCGCTATTGCAGGCGCCATCGGAGGAATCGCCGCGGCGGCGGCGGTTGGCGGGAAGCAGGCTTTGAAGAGATACGTACCGATCTAG 552 0.6504 MADSPSNSKEKSTRVYHPYQDLNVPIQKLYNLPTAPEHLFPEEAARTHRSWGDNLQYYTGTGYLSGAIIGAARGTVQGLREAESGDSLKIRLNRVLNSGGHAGRKLGNSLGVLGLIFAGLESGMIHARGTDDFLNSAVAGLGTGALYRAAAGPRSAAIAGAIGGIAAAAAVGGKQALKRYVPI 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00141 183 PANTHER TIM23 25 170 IPR045238 GO:0022857
Spst10g00141 183 Pfam Tim17/Tim22/Tim23/Pmp24 family 57 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00141 Spst-Chr10 1394085 1394636 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00141 4 179 Chloroplast and Mitochondria Gene Families AT1G17530 55.618 5.05e-62 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00141 K17794 - gmx:100779163 293.508