Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00132 ATGAATGGGGTCACGCACCTTGAACCAGATGACTCTGAGTTTGTTGAAGTTGATCCAACTGGCAGATATGGCAGATATAATGAAATCCTTGGAAAAGGAGCTTCAAAGACAGTATATAGAGCATTTGATGAGTATCAAGGGATTGAAGTTGCTTGGAACCAGGTCAAGCTGTATGATTTTCTGCAAAGTCCTGAAGATCTTGAGAGGCTTTACTGTGAAATTCATCTCCTGAAAACATTGAAGCACAGGAACATTATGAAATTTTACACTTCTTGGGTTGATACTGCGAATAGGAATATCAACTTCGTGACTGAAATGTTCACCTCCGGTACACTTAGACAGTATAGGCTAAAGCACAAGAGAGTTAACATCAGAGCGGTGAAGCATTGGTGTAGACAGATCTTGAGTGGACTTCTCTATCTTCATAGTCACGACCCGCCTGTGATCCACAGAGATCTAAAATGTGATAACATTTTTGTCAATGGAAACCAAGGGGAAGTGAAGATTGGGGATCTTGGTTTGGCAGCAATTCTCCGGAAATCTCATGCAGCTCATTGTGTAGGGACGCCCGAGTTCATGGCCCCAGAAGTATATGAAGAGGCATATAATGAGTTAGTTGACATTTATTCCTTTGGGATGTGCATACTAGAGATGGTCACATTTGAATATCCTTACAGTGAATGCACTCATCCGGCTCAAATCTATAAGAAAGTTGTTTCTGGGAAAAAGCCGGATGCTTTATATAGAGTGAAGGATCCGGATGTGCGACAATTTGTTGAGAAATGCTTGGCCACGGTGTCTCTTAGGCTTTCTGCGAGGGAGCTTCTAGATGATCCATTTCTTCGAATTGATGATTATGAGTATGATATGAGAACTGTAGAAAATGGGGAATTGGATGAATTTGGTCCTCTCATCAGACAGCCATTCTTTGATCTTCATCGAAGCTATAGTAACTTCAGTAATGAATACTCAAATGGGTTTGGGTATGAAGGAGACTGGTGTCCTCATCCGGCTGAGATTGAACCTAGTGGAATTGAACTTTTTGAGTACCATGATGATGAACCTTCTGAAGATGCTGACATAAGCATCAAGGGCAAGAGGAAGGATGATGGTGGCATCTTTTTGAGACTAAGAATTGCTGACAAAGAAGGTCGCATCCGAAATATTTATTTCCCATTTGACATAGAGATGGACACAGCAATAAGTGTGGCAACTGAAATGGTTGCAGAGCTGGACATTACTGATCAGGATGTTACCAGAATAGCTGATATGATTGACGGGGAGATTGCTTCCTTGGTACCTGAATGGAGACCAGGACCAGGAATTGACGAAACTCCCCGTTTTGCAAACCAAGGTTTCTGTCACAATTGCGTGTCTAATCATACTTCTAGCGGCTCTTTTCTGGATTTTCTTTCACACAAGCCAGGTGAGAAGAACTTGCAACTTCTCGAGTGTTGTAGGCATGGATGTGCTTCAATGCATGGGCGGTTTGAGGAGATTACCTTCCAATCTGAAGAGTATGACAACCATGCTAGAGGGGATCTGAACATATCAAGCCAATTAGACAGCTTGCAGTATGAGGAGTTATGGAACCAGCATGAAAGTCGTGAACTGAGTCCAGTAGAGTCTGATCAAAGCCATTCTGATGAACAATACGATCAACTAGATAAGTCAATTCCAGCTAAGGATAAAGAACGTGATGTTTGGGAAAACAAGGTTTCCCTCAATGCAGCAAATTCTCTAAGAAATTTATCAGGAAGTCATGATTTGTCTAATATCCGATCTGCTTATTGTGACCTTGAAGATGACTATGAAAAAGAGATTCAAAAGGAACTCAGATGGCTCAGAGCCAAGTACCAAATGGAATTAAGGGACCATAAGGATCGACAGTTTGATCAATCTTCACACAGTACTAACAAAGACCACAAAACAGAAAATGGCTCCTTGTCAGCATTACTGACAGAAACATTAAAAGAAGGCAACAATGGGACTCGGTTGAAATCGATTACTAATAAGTGGCATCGTGATTCCAGTAACCACCCTCATGTCCATGAAAGCTGCCCCAATTCGGACACCCAAAGGGCCCAAAATTGTGAGGCGAAGGAATCCCCTGACGAAGGTATGGTTACTGCGAAGAGTTTTTACACTGGCTCATTGCTTCCACTCTCTCTGCACAGGACAGTTTCCCTCCCAGTTGATGCTGTTGATATATAA 2214 0.421 MNGVTHLEPDDSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILSGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDALYRVKDPDVRQFVEKCLATVSLRLSARELLDDPFLRIDDYEYDMRTVENGELDEFGPLIRQPFFDLHRSYSNFSNEYSNGFGYEGDWCPHPAEIEPSGIELFEYHDDEPSEDADISIKGKRKDDGGIFLRLRIADKEGRIRNIYFPFDIEMDTAISVATEMVAELDITDQDVTRIADMIDGEIASLVPEWRPGPGIDETPRFANQGFCHNCVSNHTSSGSFLDFLSHKPGEKNLQLLECCRHGCASMHGRFEEITFQSEEYDNHARGDLNISSQLDSLQYEELWNQHESRELSPVESDQSHSDEQYDQLDKSIPAKDKERDVWENKVSLNAANSLRNLSGSHDLSNIRSAYCDLEDDYEKEIQKELRWLRAKYQMELRDHKDRQFDQSSHSTNKDHKTENGSLSALLTETLKEGNNGTRLKSITNKWHRDSSNHPHVHESCPNSDTQRAQNCEAKESPDEGMVTAKSFYTGSLLPLSLHRTVSLPVDAVDI 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00132 737 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00132 737 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00132 737 MobiDBLite consensus disorder prediction 627 647 - -
Spst10g00132 737 MobiDBLite consensus disorder prediction 535 563 - -
Spst10g00132 737 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Spst10g00132 737 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00132 737 MobiDBLite consensus disorder prediction 627 643 - -
Spst10g00132 737 MobiDBLite consensus disorder prediction 683 697 - -
Spst10g00132 737 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 374 428 IPR024678 GO:0004674|GO:0005524
Spst10g00132 737 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Spst10g00132 737 CDD STKc_WNK 22 281 - -
Spst10g00132 737 FunFam probable serine/threonine-protein kinase WNK9 371 455 - -
Spst10g00132 737 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Spst10g00132 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Spst10g00132 737 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Spst10g00132 737 Gene3D - 371 436 - -
Spst10g00132 737 MobiDBLite consensus disorder prediction 674 704 - -
Spst10g00132 737 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 644 - -
Spst10g00132 737 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00132 Spst-Chr10 1324697 1327672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00132 127 631 MAP Kinase Kinase Kinase AT3G04910 59.083 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Spst10g00132 Pkinase 4.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00132 K08867 - gmx:100272198 1414.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00132 10 1324697 1327672 Spst10g00132 10 1324697 1327672 ECH
Spst6g00434 6 4075034 4077752 Spst10g00132 10 1324697 1327672 PCT