Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00121 ATGGCTTTTTCTCACAACTTGGAGGTGGAATCCTCATCTCCCCCTCTCGTGTTCCCGGTGCGGAGGAGCGAACCGGAGCTGGTGGCTCCGGCCAAGCCCACTCCCCGCGAAATCAAACTCCTATCAGACATAGACACCCAAGCAGGCCTCCGGGCCCAAATTCCAATCATACAGTTCTACCGTAACGACCCATCAATGGCAGAGAAGGACCCGGTTGCAGCCATTAGACACGCTCTCGCTGAAACCCTAGTTTTCTACTACCCATTCGCTGGGAGGATTAAGGATGGTTCTGATGGGAGCCTGGTGGTAGATTGTAACGAGGAGGGTGTGTTGTTCATCGAGGCCGACGCTGATGTCACTCTCGACCAATTCGGCGACGCTCTTAAACCCCCGTTCCCGTGCTTCCAGGAACTCCTTTACCAGCCTCCTGGTTCGGAAGCGGTCACTCATACACCCATTTTTATTATACAGGTGACGCGTTTGAGGTGCGGTGGTTTCATCTTCGCGCTTCGTTTCAACCACACCATAATCGACGGAGTTGGCCTCATTCATTTCACAATTACCATGGCAGGGATAGCTCGGGGAGTCTTGCAAGAACCTCCATTCAAACCCGTGTGGTGCAGGGACCTTCTCAACGCCAGGGACCCTCCACGTGTCACATTCAACCATCGCGAGTACGAACAACTCACTGACTCCAACGACGCCGTGCCACCCGACTTCGATCAGCGCTCCTTCTTCTTCGGCCCCGCCGAAACCGCTGCCATCCGCGACCTCCTCCCCCGCGACCTCGGCCAGCAGGCCACAACCTTCGAGGTGCTGACGTCATACATCTGGCGCTGCCGCACGAGAGCACTTCAGATCGATCCGAAGGAGGACGTCAGAATGATGTGTATCGTCGACGCGCGCGACAAGTTCGAGCCTTCACTCCCAGAGGGGTACTACGGCAGCTGCTTCGCGTTCCCGGCGGCTGTGGCCGCGGCAGGAAAGCTTTGCTCGGAGCCGCTGGAGTACGCGGTGAGGCTGATACGGAAGGCGAGGGGCGAGGTGAGCGAGGAGTATATTCACTCGGTGCCGGATCTGATGGGATTTGGATTTCGGGTGGGGGAAGGCGCTGGAGGAATGGCTATTGCTGGCGCCGGGGCGTTTCCTGCAGTGAACTTTCATGTGCCGAGTCAAAACGCGAAGGGAGAGGAAGGGATTCTGGTTTTGGTTTGCTTGCCTTCACCAGTTATGAAAGCCTTTGCCAAAGAGTTGGACGACAATTTGGTTGAGACCAACAAAACTGTTTAG 1290 0.5628 MAFSHNLEVESSSPPLVFPVRRSEPELVAPAKPTPREIKLLSDIDTQAGLRAQIPIIQFYRNDPSMAEKDPVAAIRHALAETLVFYYPFAGRIKDGSDGSLVVDCNEEGVLFIEADADVTLDQFGDALKPPFPCFQELLYQPPGSEAVTHTPIFIIQVTRLRCGGFIFALRFNHTIIDGVGLIHFTITMAGIARGVLQEPPFKPVWCRDLLNARDPPRVTFNHREYEQLTDSNDAVPPDFDQRSFFFGPAETAAIRDLLPRDLGQQATTFEVLTSYIWRCRTRALQIDPKEDVRMMCIVDARDKFEPSLPEGYYGSCFAFPAAVAAAGKLCSEPLEYAVRLIRKARGEVSEEYIHSVPDLMGFGFRVGEGAGGMAIAGAGAFPAVNFHVPSQNAKGEEGILVLVCLPSPVMKAFAKELDDNLVETNKTV 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00121 429 Gene3D - 17 223 IPR023213 -
Spst10g00121 429 Gene3D - 224 418 IPR023213 -
Spst10g00121 429 PANTHER ACYL TRANSFERASE 4 18 356 - -
Spst10g00121 429 Pfam Transferase family 21 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00121 Spst-Chr10 1158317 1162171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00121 27 361 Monolignol Biosynthesis Gene Families AT5G48930 30.321 6.05e-43 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00121 K19861 - gmx:100820325 674.855