Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00116 ATGAGTGAGAGAGTGAAGAAGGAAAAGCCAACGGAGAAAAGGGAGAGGATGAAGAACATCTTCAAGAAGCTTCACATAGGTGGCAACCACGATCCTCAGCGATCCAATGAGAATTCGCCACCTACGCCGTCGCCGTCTTGCGCCGCCGATCAGTCTCAAAGCTCCGCCGCCAATCCGGCGAGCCCCTCGTCGGCCTCCGCGTCCACGGCGGTGGTGACACCTGGCGGCGGCGGCGCGAGTCCGGGGGTGAATCGGCAGGACTTTTTCTCGTCGGAGGAGGAGTTTCAGATGCAGCTAGCCCTAGCTATCAGCGCTTCCAATTCGGACTTCCGTGATGATCCTGAGAAGGATCAGATCCACGCGGCGACGCTATTGAGTTTGGGAGGCCTTCGAATCGATTCGACGGGGAACAAGGACGACGCGGCGGAGGCACTGTCGAGGCAGTACTGGGAATATAATGTGCTTGACTATGAGGAGAAAGTAGTAGATGGTTTTTATGATGTATATGGCCCCTATAACGATTCGGTAATGCAAGGAAAGATGCCGTCTCGAACAGATCTTGAAGCAAATCCGGGAGGTTCTGAGGTGGTCATTGTTAATAGAACAATTGATCCTGCTTTGGAGGAACTGATACAAATCGCCCAATGTATTGTGTTAGACTGCCCAGCCACTAGTTTGGCACAAAGGCTTGCTGAACTTGTTACAAGTCATATGGGTGGTCCTGTAAAGGATGCTAGTATTATGTTAGCAAGATGGACAGAAACAAGAGCAGAGTTAAGGACATCGCTTCACACAATTGTATTGCCTCTAGGGTCCTTAAATATTGGGCTCTCTAGGCATCGTGCTTTGCTTTTCAAGGTATTAGCTGACAACATTAATATGCCTTGTAGACTGGTAAAAGGTAGTCATTACACTGGTGTGGAGGATGATGCTGTCAACATTATAAAGTTGGAGGGTGAAAGGGAGTTTTTGGTTGATGTCATGGCTGCTCCAGGGACACTTATCCCACTTATGCCAGCTGATATTTTAAGCACCAAGGAGAATGCCTTTAACAAGTCTTTTAATCCCAAGATTTTACCCGGTTTACCTTCCACCAAGGATACTGAATTTTCTTACTCAAGACCTATCCAACCATCTCATGGTGAAGGTAGTAGTCAAAATTCTGTGTCAAAAGATCCTTCACCTCCTTGGAATGGAAAATCATATTTTGAGAAGTCAGAGCCTTCAAACTTAGGTTTGAGAAGAGACAGTGGTGTTGGTCCTTCAAAAATTCCTAATAGAGGGACCCCCAACCAACTAGAGAATTTGCCAGCTTTGTCTGGTACTTCTCTGTACAAAGGGACCCTCGGAATGAATACAGTTGGTGATGGGACGAGACTTAATGTCAATGTCGTACCATATACTCAAAACACCTCTAATGACTCTCGAAATCTTTTTGCAGATCTTAACCCATTCCAAATAAAAGGAATGGGGAAGGCCTCTGTGCTTAACAAACCCGTGGAAAGTAAACCTCCTGAGATTAGAAATACTAAAAACAACACTGTTTCTGGCCGACCCCCAGTGCAACTGACGTGGAAGAATCGTCATGCTTACAATGAAGACCCTAGGAAAACTAATCAGAATGCCAAAGAATACAACCCTCCCTTTGTTTCTAATGGTTCTTCTACATCTGAAATTATTGACCTTAGTAGTTCCAAACCATTATATAATTCAAATTTAAATAATGATGTAAATGCTCAAACTCTGGAACATGTTACTGGTTCAGTTTCACCATCTTCTGTACCCGAACTGAACCAGATTGAGGATCAAAATGCTGGTTTTAACCAGGGGGGTTGGGAAAATTCTCAAAACTTCATGGTAGGGGTGATTAGAGAACCTGAAAACGCAGAAATAAGACATCATGACAGATTCATTGGAAACAATTTCAAACTAAAAGAACCAGAGAGTCCTAGCTCATCAATTGATTCATTCACAAACAGGGTTGATCAAATATTGGATGATGTAGATGTTGGTGAATGTGAGATTCCATGGGAGGATCTGGTTCTTGGTCAAAGAATTGGCATAGGTTCATATGGCGAGGTATACCAAGCCGACATGAATGGCACGGAAGTTGCTGTAAAGAAGTTTTTAGATCAGGATTTTTCAGGAGCTGCATTGTCTGAATTCAAAAGAGAAGTACGGATAATGCGTAGGTTACGGCATCCAAATATTGTTCTATTTATGGGTGCTGTTACTCGTCCTCCCAATCTCTCAATCATTTCAGAGTATCTACCGAGAGGAAGCTTGTACCGATTACTTCATCGCCCTAATTGTCAGATCGATGAGAAACGAAGAATAAAAATGGCCCTGGATGTGGCTAGGGGCATGAATTGCTTACACACCAGCACACCTATAATAGTCCACCGAGATCTAAAGTCTCCAAATCTTTTGGTTGATCAGAACTGGAATGTTAAGGTATGTGATTTTGGGTTGTCACGGTTGAAGCACAACACCTTTTTGTCATCCAAGTCAACTGCTGGAACGCCGGAATGGATGGCTCCTGAAGTTCTCCGCAATGAACCCTCGAATGAGAAATGCGATGTTTATAGTTTTGGAGTCATCCTGTGGGAGCTTGCCACTCTAAGGTTGCCGTGGACTGGAATGAATCCTATGCAAGTTGTTGGTGCTGTTGGTTTCCAAAATCGTAGACTTGAAATTCCTAAGGAAGTTGATCCTATGGTTGGAAGAATAATCTGGGAGTGTTGGCAACAGGATCCGAATTTGCGGCCCTCCTTTGCACAACTCACGGTGGCTCTAAAGCCTCTGCAGCGTCTGGTTATCCCATCTCATCAAGACCAGGTAGCTCCACATATGCCGCATGAGATTTCTGTAAATTCCACCCCATGA 2886 0.4463 MSERVKKEKPTEKRERMKNIFKKLHIGGNHDPQRSNENSPPTPSPSCAADQSQSSAANPASPSSASASTAVVTPGGGGASPGVNRQDFFSSEEEFQMQLALAISASNSDFRDDPEKDQIHAATLLSLGGLRIDSTGNKDDAAEALSRQYWEYNVLDYEEKVVDGFYDVYGPYNDSVMQGKMPSRTDLEANPGGSEVVIVNRTIDPALEELIQIAQCIVLDCPATSLAQRLAELVTSHMGGPVKDASIMLARWTETRAELRTSLHTIVLPLGSLNIGLSRHRALLFKVLADNINMPCRLVKGSHYTGVEDDAVNIIKLEGEREFLVDVMAAPGTLIPLMPADILSTKENAFNKSFNPKILPGLPSTKDTEFSYSRPIQPSHGEGSSQNSVSKDPSPPWNGKSYFEKSEPSNLGLRRDSGVGPSKIPNRGTPNQLENLPALSGTSLYKGTLGMNTVGDGTRLNVNVVPYTQNTSNDSRNLFADLNPFQIKGMGKASVLNKPVESKPPEIRNTKNNTVSGRPPVQLTWKNRHAYNEDPRKTNQNAKEYNPPFVSNGSSTSEIIDLSSSKPLYNSNLNNDVNAQTLEHVTGSVSPSSVPELNQIEDQNAGFNQGGWENSQNFMVGVIREPENAEIRHHDRFIGNNFKLKEPESPSSSIDSFTNRVDQILDDVDVGECEIPWEDLVLGQRIGIGSYGEVYQADMNGTEVAVKKFLDQDFSGAALSEFKREVRIMRRLRHPNIVLFMGAVTRPPNLSIISEYLPRGSLYRLLHRPNCQIDEKRRIKMALDVARGMNCLHTSTPIIVHRDLKSPNLLVDQNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWTGMNPMQVVGAVGFQNRRLEIPKEVDPMVGRIIWECWQQDPNLRPSFAQLTVALKPLQRLVIPSHQDQVAPHMPHEISVNSTP 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00116 961 ProSitePatterns Protein kinases ATP-binding region signature. 686 708 IPR017441 GO:0005524
Spst10g00116 961 MobiDBLite consensus disorder prediction 506 521 - -
Spst10g00116 961 ProSitePatterns Serine/Threonine protein kinases active-site signature. 799 811 IPR008271 GO:0004672|GO:0006468
Spst10g00116 961 MobiDBLite consensus disorder prediction 541 556 - -
Spst10g00116 961 MobiDBLite consensus disorder prediction 366 395 - -
Spst10g00116 961 Gene3D Phosphorylase Kinase; domain 1 673 757 - -
Spst10g00116 961 MobiDBLite consensus disorder prediction 1 86 - -
Spst10g00116 961 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 64 936 - -
Spst10g00116 961 CDD STKc_MAP3K-like 686 929 - -
Spst10g00116 961 SUPERFAMILY Protein kinase-like (PK-like) 670 952 IPR011009 -
Spst10g00116 961 FunFam PAS domain-containing protein tyrosine kinase family protein 758 948 - -
Spst10g00116 961 Pfam Protein tyrosine and serine/threonine kinase 681 930 IPR001245 GO:0004672|GO:0006468
Spst10g00116 961 MobiDBLite consensus disorder prediction 31 73 - -
Spst10g00116 961 Pfam Ethylene-responsive protein kinase Le-CTR1 142 335 - -
Spst10g00116 961 SMART serkin_6 680 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00116 961 MobiDBLite consensus disorder prediction 424 439 - -
Spst10g00116 961 PRINTS Tyrosine kinase catalytic domain signature 903 925 IPR001245 GO:0004672|GO:0006468
Spst10g00116 961 PRINTS Tyrosine kinase catalytic domain signature 754 767 IPR001245 GO:0004672|GO:0006468
Spst10g00116 961 PRINTS Tyrosine kinase catalytic domain signature 793 811 IPR001245 GO:0004672|GO:0006468
Spst10g00116 961 PRINTS Tyrosine kinase catalytic domain signature 840 850 IPR001245 GO:0004672|GO:0006468
Spst10g00116 961 PRINTS Tyrosine kinase catalytic domain signature 859 881 IPR001245 GO:0004672|GO:0006468
Spst10g00116 961 MobiDBLite consensus disorder prediction 354 439 - -
Spst10g00116 961 MobiDBLite consensus disorder prediction 497 556 - -
Spst10g00116 961 FunFam Serine/threonine-protein kinase isoform 1 671 758 - -
Spst10g00116 961 ProSiteProfiles Protein kinase domain profile. 680 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00116 961 Gene3D Transferase(Phosphotransferase) domain 1 759 941 - -
Spst10g00116 961 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00116 Spst-Chr10 1063312 1071670 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00116 17 916 MAP Kinase Kinase Kinase AT1G08720 54.777 0.0 890
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Spst10g00116 PK_Tyr_Ser-Thr 1.2e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00116 - - gmx:100818780 1637.85