Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00115 ATGCCCGTTCCTAATGGAGAAGAGCAGGTTCTGTTGGCTTCAGAAAATGCAAGCGAGGTCTCGAAGTCACCCTCGTTGGATTTGAGCCCAGATTCAGATTCAGTTGATGGGTCCCCCCCTGTTTCCACCGTTTACACTGATGTGGGTGTCGTGCCAGAACACCAAAAGAACGAGCTTGAGCACCTTATATCCAATTTAGAAAGAGAAATTGAGGAGCTGAGGTTGAAGCAGAAGAAACTGGATAAAAAGCGGAGAGAAGCATTGAGCAAGATATTGGACATCAAAGGGAGCATTCGGGTTTTTTGTAGAATTCGACCAAATCTGGTAACGGAGAAGAGAAGAATTTCTGAACCGGTATCAGCTGGACCAGAGAAAATTCGGGTTAAGTTGGGGGGAACAAGGAAAGATTTTGAGTTTGATGAAGTTTTTACTCAAGAAACAAGCCAAGAAAGTGTTTTTGTTGAGGTTGAGCCAATTCTAAGATCTGCAATGGACGGGCACAATGTGTGTGTGTTTGCTTACGGTCAAACAGGCACAGGCAAGACATTCACCATGGATGGTACAAACGAGCAGCCTGGAATTATTCCGCGTGCCCTTGAAGAGCTCTTTCATCAAGCCTCTTTGGATACCTCATCTTCTTTTACCTTTTCAATGAGCATGTTAGAAGTTTATATGGGCAATCTCAGGGATTTGCTAGCTCCAAGACAGTATGGAAGACCACATGAACAACCTATGACAAAGTGCAATCTCAACATCCAAACAGATCCAAAGGGGTTGATTGAAATTGAGGGTCTTCTGAAGTCACACTGCTTAACGAGGATAAGCATATTTCGACGTGGGGATGCTTCGGAAGCCAAAAGTGAAGTAAGTAAATTGTGGATGGTTGATCTCGGAGGTAGCGAACGGTTGCTTAAAACTGGAGCCAAAGGACTAACATTGGACGAGGGCAGAGCCATTAATCTTTCTCTTTCAGCTTTAGCTGATGTTGTTGCAGCTTTGAAGAGGAAGAGGTGTCATGTGCCATACAGGAATAGCAAGCTGACTCAGTTACTGAAAGATTCTCTTGGGTATGGCTCAAAGGTGTTGATGCTCGTGCACATAAGCCCTTCTGAAGAAGATGTCTGTGAGACAATATGTTCCTTGAACTTTGCAAAGAGAGCGAGAGCAATAGAGTCCAACAAAGAAGTGCCTGTGGAAGTGAAGAAGCAAAGGGAGAAGAAGATTATGGAGCTAGAGGAAGACATCAAGGAAGCTGAAAAACAACGCCAGAATTTAAGGGTAGAAACACAGAAGATTGAGTTGAAGCTAAATGATAGTAAAAAGCTTTTATCAACCTCATATAGTCTTGTGGAAAGTGATGACATGACAACCTCAATTAGCCCCAACGATGATGTGAAAGAGGTGATTGAAACCCCTAAAGCATCTAAGGAGTCCATTAAAAGAAATTTCTCCAACTCAATGCCTCGATTCATGACTTCAACCGTTGCAAGTCGCCAAAGGCAATGTGCTGCAGAGCGAGACATTGACACTGTGAAATTGAAAAGTTATAGATCAGTCTCTAAAAGTTCCATCCATTTTTCATATTCCCAATCATTAAGTTATTCAGATATCCGCATCAAAGCGATACTGCGAAGTTCAAATGGAAAATCTCGGCATGCTGAAACAGATAGTATTCCAATTCCAAACCCCGTTCTCACAGAAAGGCCTAAATGCAATGATTTGGAATCAAAAGTCACTACCCCGCGAAGCAGGATGGTTACATCTTCAGACCAAAACTTGAGAGTTTCACTGGGTCGTCATAGAAGAAGGATGTCTGATCTGATCTAA 1827 0.428 MPVPNGEEQVLLASENASEVSKSPSLDLSPDSDSVDGSPPVSTVYTDVGVVPEHQKNELEHLISNLEREIEELRLKQKKLDKKRREALSKILDIKGSIRVFCRIRPNLVTEKRRISEPVSAGPEKIRVKLGGTRKDFEFDEVFTQETSQESVFVEVEPILRSAMDGHNVCVFAYGQTGTGKTFTMDGTNEQPGIIPRALEELFHQASLDTSSSFTFSMSMLEVYMGNLRDLLAPRQYGRPHEQPMTKCNLNIQTDPKGLIEIEGLLKSHCLTRISIFRRGDASEAKSEVSKLWMVDLGGSERLLKTGAKGLTLDEGRAINLSLSALADVVAALKRKRCHVPYRNSKLTQLLKDSLGYGSKVLMLVHISPSEEDVCETICSLNFAKRARAIESNKEVPVEVKKQREKKIMELEEDIKEAEKQRQNLRVETQKIELKLNDSKKLLSTSYSLVESDDMTTSISPNDDVKEVIETPKASKESIKRNFSNSMPRFMTSTVASRQRQCAAERDIDTVKLKSYRSVSKSSIHFSYSQSLSYSDIRIKAILRSSNGKSRHAETDSIPIPNPVLTERPKCNDLESKVTTPRSRMVTSSDQNLRVSLGRHRRRMSDLI 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00115 608 SMART kinesin_4 95 398 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst10g00115 608 Gene3D Kinesin motor domain 267 435 IPR036961 -
Spst10g00115 608 MobiDBLite consensus disorder prediction 11 41 - -
Spst10g00115 608 Pfam Kinesin motor domain 125 265 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst10g00115 608 Pfam Kinesin motor domain 267 390 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst10g00115 608 Coils Coil 56 90 - -
Spst10g00115 608 PANTHER KINESIN-LIKE PROTEIN KLP-3 57 264 IPR027640 GO:0003777|GO:0007018
Spst10g00115 608 MobiDBLite consensus disorder prediction 1 43 - -
Spst10g00115 608 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 429 IPR027417 -
Spst10g00115 608 Gene3D Kinesin motor domain 44 266 IPR036961 -
Spst10g00115 608 Coils Coil 401 435 - -
Spst10g00115 608 PRINTS Kinesin heavy chain signature 291 309 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst10g00115 608 PRINTS Kinesin heavy chain signature 340 361 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst10g00115 608 PRINTS Kinesin heavy chain signature 166 187 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst10g00115 608 ProSiteProfiles Kinesin motor domain profile. 97 390 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00115 Spst-Chr10 1057872 1061218 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00115 69 390 Calmodulin-binding Proteins AT5G65930 36.512 7.29e-58 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00115 - - gmx:100785581 1002.28