Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00104 ATGGAGTGCAACAAAGACGAGGCTGTGAGGGCTAGACAAATGGCCGAAGCTAGAATGCAAAGAGGTGAATTTGTGGAAGCGCTCAGGTTTGCTGCCAAGGCTAAAAAACTTTATGCTGATGTTGAAAATATTACTCAGATTCTTACCGTCTGCGAGGTTCACAATGCTGCGCATAAAAAACTCTCTGCCTCTGCTGACATGGACTGGTATGCGATACTTCAGATTGAAAAGTTGGCTGATGAAGCAGTCATAAAGAAACAGTACAGGAGGCTTGCATTGCTACTTCATCCTGATAAGAACAAGTTTGCTGGCGCAGAAGCTGCTTTCAAGTTGATTGGGCAAGCCAATGGAGTGCTGAGTGACCGAGCAAAACGTTCTTCGTTTGACAAGCAGTTTGGAATCTCTGCGAGAGGTGCTGCGCCGAAGGCCACTGCAAAAAAACATCAGAAGAGTTCTGAAACACACCATAATTCAGATGGAAATGTGTTTACTGCAAAATATGATGAAAATGCAACAAATTATCAGAATAAATCTTTTCCGAACCCCGATTGTTTCAACAACCAAGTTGGACTGATAACATTCTGGACATCTTGCGTACATTGTAATTCCAAGTACCAGTACTGCGTAAAATATGTGAATGCAAACTTATTGTGCCAACAGTGTTTGAAGCCATTTAAAGCTCATATTGTTAGTTTTGGACAAGTGGGTGTCTCATCGTCAATGTTTACTTCAGAAAATATCCAGAACGAAGCTCCAGTTCGTGGTCCCTCAAAACCAGATTCAAAAACCACTGGTGGAAAACCCCTAGGTAGAGAACGTACTGCCACGTTTGCGCGGTCAAATACTGCTTCCATGAAAAAATGTGCTGCTGGAGTTGATGCGCATTGTAAAGGTGAAAAGAGTAAAGATGGCTGTGTTCCTGTATTCAAAGGCATGGAGTCACAATCATATAAAAATGTTGGAAGTAAGAGAGTAAAGCAGTCAGCACCAGATTCAGGAGAAAGCTTCAAAGCTAGAACTGGTGATGAGATGAGAGATGCCAATGTCCGAGAAAACGATCTTGATCCTTCAAGAGTTAATGCTAGGAGATCTACAAGGAGAAAACAACATGTTTCATATGTGGAAACCTCTGAAGATGACGATCTCGAAATTCCTTCCAAAACGCCACGACCAAATGAACCGCTTAATGCCGATGACGTTGAGAATAAGAATGTTCCCGCAAGTAATGGATCATCCAATAGCGACAATCCAGCTACTTCAGCTGCTGGTGTGGCTGATCAGAACAGAGAGAAGGTATCCAAGTCAAAAGAGGAAAACTGCTCGCCAGTGAATTCAAATGTTCCTTCTGCTTCAAATATATTGCCTTGTTTTGACGCAGATTTCAATGATTTTGAAAAGGATAAGGAGGAGGATTGTTTTGCTGTTAAGCAAATGTGGGCAGTGTATGATAACTTCGATTCGATGCCAAGATTTTATGCTATTGTCAAGAAAGTGATTTCCCCTTTCGAGTTGCAGATTACTTGGTTGGAACCTGATCCAGACGACAAAGACGAGCTTGATTGGCATCATGCACATTTTCCTATTTCATGCGGTAAGTTCAGACTCGGTCGTTCTCAGAAAATTTCATGTCGTACTGCGTTCTCTCATCAGGTGCAATGCGTCAAAGAAACTGGCAAACGTTCTTACCTGGTATGCCCTAATAAAGGAGAAACTTGGGCAATTTTTAGAGATTGGGATATCAAATGGAGTTCTAATCCAAAAAAACGTTCCGAGTATGACTATGAATATGTGGAAATCCTTTCAGATTTTTCTAAAGATGTTGGCATCGCAGTTGCATATCTGCGCAAAGTGAAAGGATTTCTTAGCCTCTTACAGAAAACTGGGAAGAATGGAATGGACATATTTTATGTCGGGCCTAATGAGCTATATAGGTTCTCGCATCAAATTCCTTCGTATAAGATGACTGGTGATGAAAGGAAGGGTGTTCCAAGAGGATCTTTTGAATTTGATCCTGCTGCCCTGCCTACTAATTTCTTTGAAGCTGCTGATTGGGCTAAATTTCATCATGAATATCGGAAACATTGA 2085 0.4149 MECNKDEAVRARQMAEARMQRGEFVEALRFAAKAKKLYADVENITQILTVCEVHNAAHKKLSASADMDWYAILQIEKLADEAVIKKQYRRLALLLHPDKNKFAGAEAAFKLIGQANGVLSDRAKRSSFDKQFGISARGAAPKATAKKHQKSSETHHNSDGNVFTAKYDENATNYQNKSFPNPDCFNNQVGLITFWTSCVHCNSKYQYCVKYVNANLLCQQCLKPFKAHIVSFGQVGVSSSMFTSENIQNEAPVRGPSKPDSKTTGGKPLGRERTATFARSNTASMKKCAAGVDAHCKGEKSKDGCVPVFKGMESQSYKNVGSKRVKQSAPDSGESFKARTGDEMRDANVRENDLDPSRVNARRSTRRKQHVSYVETSEDDDLEIPSKTPRPNEPLNADDVENKNVPASNGSSNSDNPATSAAGVADQNREKVSKSKEENCSPVNSNVPSASNILPCFDADFNDFEKDKEEDCFAVKQMWAVYDNFDSMPRFYAIVKKVISPFELQITWLEPDPDDKDELDWHHAHFPISCGKFRLGRSQKISCRTAFSHQVQCVKETGKRSYLVCPNKGETWAIFRDWDIKWSSNPKKRSEYDYEYVEILSDFSKDVGIAVAYLRKVKGFLSLLQKTGKNGMDIFYVGPNELYRFSHQIPSYKMTGDERKGVPRGSFEFDPAALPTNFFEAADWAKFHHEYRKH 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00104 694 MobiDBLite consensus disorder prediction 248 273 - -
Spst10g00104 694 SMART dnaj_3 67 124 IPR001623 -
Spst10g00104 694 MobiDBLite consensus disorder prediction 336 387 - -
Spst10g00104 694 PRINTS DnaJ domain signature 104 124 IPR001623 -
Spst10g00104 694 PRINTS DnaJ domain signature 70 88 IPR001623 -
Spst10g00104 694 PRINTS DnaJ domain signature 88 103 IPR001623 -
Spst10g00104 694 CDD DnaJ 68 121 IPR001623 -
Spst10g00104 694 Gene3D DnaJ domain 65 179 IPR036869 -
Spst10g00104 694 MobiDBLite consensus disorder prediction 318 446 - -
Spst10g00104 694 Pfam Domain of unknown function (DUF3444) 454 658 IPR024593 -
Spst10g00104 694 Pfam DnaJ domain 68 129 IPR001623 -
Spst10g00104 694 MobiDBLite consensus disorder prediction 139 162 - -
Spst10g00104 694 SUPERFAMILY Chaperone J-domain 65 131 IPR036869 -
Spst10g00104 694 MobiDBLite consensus disorder prediction 402 423 - -
Spst10g00104 694 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 684 - -
Spst10g00104 694 ProSiteProfiles dnaJ domain profile. 68 132 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00104 Spst-Chr10 957377 959461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00104 4 227 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.018 3.89e-23 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00104 - - gmx:102662460 922.539