Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00080 ATGGAAGTTAATACTACAACCACTGTATCTGCAAGGCCACCGACTAAGAACCACTCTTTCACACAGCACCGCTTACATTCAGAAAGACATAGCCATAGCCATGGCCATTTCCCCCCCAAAACCATTCTCATAACCATCTCACTGATCACCTTACTTACGGTCCTATTTGTCATTTTTGTGGTCCTATTCTTGATCCGTCGTCAAAAATCCTCCAGCAAGAATGGAACTTGCGAAGAAGACAGCAGAGAGCTTCATGACACAAGCAGCAGGCTCATTACTTCATCAACTTTGAATTCTAGCCCAGATGTGAAGAGTGGGTGTCTTCACGGGGGAAATTTGAGCAGGACCCCAGCACCTAAATTTCGAGGAGTCCAAGTGTTCACATACAGAGAGTTAGAAATTGCCACAGATGGATTCAGAGAAGGAAATGTGATTGGTAGTAATGGAGGGCATGGCTTCATGTATAGAGGAGTTCTAAGTGATGGCACTTTGGCAGCAATTAAGTTACTTCGCAGTGAGGGTAAGCAAGGGGAGCGTGCCTTCAGAATAGAGGTCGATCTCCTAAGTCGCTTGCACTCTCCATTTTTGGTGGAGTTACTTGGCTATTGTGCTGACCAACACCACAGGTTATTGATTTTTGAATACATGCCCAATGGTACACTCCACCACCATCTTCACTCCTCCAATGATCAAACTCAACCGTTGGATTGGTGGGCCCGGATGAGGATAGCCCTTGATTGTGCCAGGGCACTGGAATTCCTTCATGAACATGCAGTATCTCCTGTGATCCACAGAGACTTCAAGAGTAACAACGTTCTATTGGATCAAAATTTCCGTGCAAAGGTGTCTGATTTTGGATTGGCTAAGATGGGATCAGAGAAGAGGAACGGTCAGGTTTCCACCCGTGTGTTGGGGACCACTGGATACCTGGCACCAGAGTACGCCACGGGTAAGCTTACCACAAAGTCTGATGTTTACAGCTATGGTGTGGTTCTTCTAGAACTACTCACGGGACGCGTGCCTGTTGATATCAAGCGGGCCCAGGGAGAACACGTCCTTGTCTCTTGGGCTCTTCCAAGGTTGACAAACAGAGAAAAGGTGATTGAAATGGTTGACCCAGCTCTACGCGGACAGTACTCAAAGAAGGATTTAATTCAGATAGCTGCCATTGCAGCAATGTGCATACAGCCAGAAGCTGATTACAGGCCGCTCATGACAGATGTTGTACAATCACTGATACCGCTTGTTAGGAACCCATCCTCTCTTAGTTCTAGCTCCCTACGATTTCAGAAACAAACGCCAAGTCCATGTCATTAG 1317 0.4662 MEVNTTTTVSARPPTKNHSFTQHRLHSERHSHSHGHFPPKTILITISLITLLTVLFVIFVVLFLIRRQKSSSKNGTCEEDSRELHDTSSRLITSSTLNSSPDVKSGCLHGGNLSRTPAPKFRGVQVFTYRELEIATDGFREGNVIGSNGGHGFMYRGVLSDGTLAAIKLLRSEGKQGERAFRIEVDLLSRLHSPFLVELLGYCADQHHRLLIFEYMPNGTLHHHLHSSNDQTQPLDWWARMRIALDCARALEFLHEHAVSPVIHRDFKSNNVLLDQNFRAKVSDFGLAKMGSEKRNGQVSTRVLGTTGYLAPEYATGKLTTKSDVYSYGVVLLELLTGRVPVDIKRAQGEHVLVSWALPRLTNREKVIEMVDPALRGQYSKKDLIQIAAIAAMCIQPEADYRPLMTDVVQSLIPLVRNPSSLSSSSLRFQKQTPSPCH 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00080 438 MobiDBLite consensus disorder prediction 1 20 - -
Spst10g00080 438 Gene3D Phosphorylase Kinase; domain 1 112 215 - -
Spst10g00080 438 PANTHER OS07G0668900 PROTEIN 90 421 - -
Spst10g00080 438 SUPERFAMILY Protein kinase-like (PK-like) 121 412 IPR011009 -
Spst10g00080 438 MobiDBLite consensus disorder prediction 73 87 - -
Spst10g00080 438 FunFam Serine/threonine-protein kinase PBS1 107 215 - -
Spst10g00080 438 FunFam Receptor-like serine/threonine-protein kinase ALE2 216 431 - -
Spst10g00080 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Spst10g00080 438 Gene3D Transferase(Phosphotransferase) domain 1 216 427 - -
Spst10g00080 438 MobiDBLite consensus disorder prediction 73 98 - -
Spst10g00080 438 CDD STKc_IRAK 145 415 - -
Spst10g00080 438 Pfam Protein tyrosine and serine/threonine kinase 149 412 IPR001245 GO:0004672|GO:0006468
Spst10g00080 438 ProSiteProfiles Protein kinase domain profile. 140 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00080 438 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00080 Spst-Chr10 765698 768586 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00080 107 436 Receptor kinase-like Gene Family AT3G58690 61.062 7.74e-147 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Spst10g00080 PK_Tyr_Ser-Thr 2.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00080 - - gmx:100499645 754.592