Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00055 ATGGACGATCAATCGGTTCAAATCCAAATCCTCGCTGAAAAATTCCACCGGCTCGTTCTTGACTACGAATTCAAGCAACCGCCTGTCGCTCCCGGCTCAGATGATGTATCGAATCAGGTGAACGAGAACTTAGACTCCATGGACGAAAACAGTATGTCCCATGAAATCCTCCAAGTTTCTCCGGATCAGGGCCACACACTTCCCATATTGAAGAAAATACTTGATCTCAGCAATAAAATTCAGGATTTGAAGATCCAGCATGTAGCATTGTCTGATGAAGTGAAACAAACTACTGAATCTTTTCCGGGCAATGATGTTTTGAAATCTGTGCAGCTTCTCGGTGCTGAATACGAACTCTTAAAAAGAAAGTACCTGGACGAGTCATCTGAGCGTAGGCGGCTTTACAATGAAGTAATTGAACTCAAGGGGAATATCAGAGTTTTCTGTAGATGCAGACCATTAAATGAGAGTGGGTCAGCATCTGTAATCAATTTTGATTCGTCTTCAGATAATGAGCTTCAAGTCATTTGTACAGATTCTTCTAAAAAGCAATATAAATTTGATCATGTATTCGGCCCAGAAGATAATCAAGAGGCTGTTTTTCAACAGACCAAACCCATTGTTACATCAGTATTGGATGGGTATAATGTCTGCATTTTTGCCTACGGGCAAACTGGAACTGGGAAAACATTTACGATGGAAGGAACACCAGAACAGAGGGGAGTTAACTACAGAACCCTGGAAGAACTATTTCGGATAACTGAAGAGAGACATGGCACAATGAAGTATGAATTGTCAGTTAGCATGCTGGAGGTTTACAATGAGAAGATAAGAGATTTGTTGGTGGAAAATTCCACCCAACCTACAAAAAAATTGGAGATAAAGCAAGCTGCCGATGGAACCCAAGAAGTCCCTGGACTTGTTGAAGCTCGTGTTTATGGAACAGAAGATGTGTGGGAAATGCTTAAGACGGGAAATCGAGTCAGATCAGTTGGATCCACCTGTGCTAATGAGCTTAGCAGTCGTTCTCACTGCTTGTTACGAGTAACTGTAATGGGGGAAAATTTAATCAATGGCCAGAGAACAAGGAGTCACCTTTGGCTTGTAGACTTAGCTGGTAGTGAGCGAGTGGGAAAAACTGAAGCTGAAGGAGAAAGACTGAAGGAATCTCAATTCATAAATAAGTCACTTTCTGCGCTCGGTGATGTCATTTCTGCCCTTGCTTCTAAATCGGGCCATATTCCTTACCGGAACTCAAAACTCACTCATATGCTGCAAAGTTCTTTAGGTGGAGACTGCAAAACGTTGATGTTTGTGCAGGTAAGTCCAAGCGCAACAGACTTGGGAGAGACACTTTGCTCACTGAATTTCGCCACCCGTGTCCGTGGAATTGAGGGTGGCCCAGCTCGCAAGCAAGTAGACCACACTGAACTGTTTAAGTACAAGCAAATGGTAGAAAAGCTCAAACAAGACGAGAAGGAAACAAAGAAATTAAAGGATAACTTGCAAATTGTGCAACTCAGGCTTGCTTCAAGAGAACACCATTGTAGAACCCTTCAGGAAAAGGTTCGGGACCTGGAGAATCAGATAGCAGAAGACAGAAAACACAGACTAAAGCAAGAAAGTAGAGCACTTGCTGCTGTTTCGGCTCAACCTTCATCATTATCACAACACACAACGGCCCAGAAAACAATGACAAACAAGAAGCCACCACTGAATCCTTCCAAACTCAGACAACCACTGAGAAAAATAACTAACTCCTTGCCTCCACGGTCTCCTCTAAGATCAAAGAGTTACACCACATTCATGAATGGAAAGGAAAACTCTGCGAGAAGGGCTTCAGTGGCGATCAGTACCGTGAGGCCAGCTGCGCCATCGACCACACAGCAGTTCTTTCAGGCAAGGAGGCGGGTGTCCATTGCCACGAGACCACCATCTGCACCATCAACAACGCATGTCATTCTGCCAAGGAGGAGGGTCTCCATTGCCACACTACCTCTTCAGTCAACTTCTGGCATGACAACTCCTCTCCGTACCTCAGAATTCCGAGTTACCAGTGGAAGCAGTCAACAATCACGGATAAGAAGCCAAAGGAAAGATAGGTATTCAAGTTTGTTTGCCCCATTACCAGAGTTGAGAGAAACAGTTTTGACAACACCAATGTCTGTAAAGAGCAGCAGCAAGTTTATGAACAGTCCAACACAGGCAGATTCCAGGATGATGGGGCCCGTTAAAAATCAACCTGTTATCGCTCTACAACGAAAACCTGTGGTGTGGAGTCCTCTTAGGGTAAGAGCCATGAACAGAAAGTCAGCACTCTTGCCATATCGCCCAACCCAAATGCAGTAA 2349 0.4419 MDDQSVQIQILAEKFHRLVLDYEFKQPPVAPGSDDVSNQVNENLDSMDENSMSHEILQVSPDQGHTLPILKKILDLSNKIQDLKIQHVALSDEVKQTTESFPGNDVLKSVQLLGAEYELLKRKYLDESSERRRLYNEVIELKGNIRVFCRCRPLNESGSASVINFDSSSDNELQVICTDSSKKQYKFDHVFGPEDNQEAVFQQTKPIVTSVLDGYNVCIFAYGQTGTGKTFTMEGTPEQRGVNYRTLEELFRITEERHGTMKYELSVSMLEVYNEKIRDLLVENSTQPTKKLEIKQAADGTQEVPGLVEARVYGTEDVWEMLKTGNRVRSVGSTCANELSSRSHCLLRVTVMGENLINGQRTRSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKSGHIPYRNSKLTHMLQSSLGGDCKTLMFVQVSPSATDLGETLCSLNFATRVRGIEGGPARKQVDHTELFKYKQMVEKLKQDEKETKKLKDNLQIVQLRLASREHHCRTLQEKVRDLENQIAEDRKHRLKQESRALAAVSAQPSSLSQHTTAQKTMTNKKPPLNPSKLRQPLRKITNSLPPRSPLRSKSYTTFMNGKENSARRASVAISTVRPAAPSTTQQFFQARRRVSIATRPPSAPSTTHVILPRRRVSIATLPLQSTSGMTTPLRTSEFRVTSGSSQQSRIRSQRKDRYSSLFAPLPELRETVLTTPMSVKSSSKFMNSPTQADSRMMGPVKNQPVIALQRKPVVWSPLRVRAMNRKSALLPYRPTQMQ 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00055 782 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 500 IPR027417 -
Spst10g00055 782 PRINTS Kinesin heavy chain signature 214 235 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst10g00055 782 PRINTS Kinesin heavy chain signature 334 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst10g00055 782 PRINTS Kinesin heavy chain signature 414 435 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst10g00055 782 PRINTS Kinesin heavy chain signature 365 383 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst10g00055 782 SMART kinesin_4 142 472 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst10g00055 782 ProSiteProfiles Kinesin motor domain profile. 144 464 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst10g00055 782 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 597 IPR027640 GO:0003777|GO:0007018
Spst10g00055 782 Gene3D Kinesin motor domain 139 507 IPR036961 -
Spst10g00055 782 CDD KISc_C_terminal 142 465 - -
Spst10g00055 782 FunFam Kinesin-like protein 139 504 - -
Spst10g00055 782 ProSitePatterns Kinesin motor domain signature. 364 375 IPR019821 GO:0003777|GO:0005524|GO:0007018
Spst10g00055 782 Coils Coil 481 536 - -
Spst10g00055 782 MobiDBLite consensus disorder prediction 547 577 - -
Spst10g00055 782 Coils Coil 73 100 - -
Spst10g00055 782 Pfam Kinesin motor domain 150 464 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00055 Spst-Chr10 603260 607377 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00055 110 490 Calmodulin-binding Proteins AT5G65930 42.092 1.06e-81 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00055 K10406 - gmx:100788477 1267.68