Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00051 ATGAGAGTTTCGCGGCAATGCGTTACTCTCTATCTCTCTCTGCGTAAACCCGACCACTCTCGTTTGCCTCTTCATCTCTCGTGCTTCAGCGGGAATCGGAACCCTACAAGGCGGTGCATTGTGAATTTACCATATCCCAGGGGCTCAATGGCACCGGCAAGGAAATCTAGAAGTGTTAATAAGCGGATTTCAAATTCGAATGATGTTTCTCCGGAGAAAGATGGAGTTAGTTCTAATAAAAACAAGCAACGGAAGAAAAAGTTGACTGATAAATTGGGATCTCAGTGGAGCAAAGAGGAACTAGAGCGATTTTATGAAGCATATAGAATGTATGGGAAAGACTGGAAGAAGGTGGCTGGTGTTGTACGTAATAGATCCACTGAAATGGTAGAAGCTCTTTACAATATGAATCGGGCATACCTCTCTCTGCCTGAGGGCACGGCTTCTGTTGTTGGTCTCATAGCAATGATGACAGATCACTACAATGTGCTGTTTGTTACAGCTGTTCTGCTACCCATATGTAATACTCCTTTGCTCATAAACCTATATGGGTTCTGTAAGTTGCACCTTTTCTCTTTGCCCCTCATGGAAGAGAGTGACAGTGAAAGGGAGAGCAATGATGCACCAGGATCTCGGAAATTTGTAAAACGAAAGCGTGAAAAAATTCAGCTTAGTGTGTCTAAAGATCAGTCTCATTCAATTGCATCGAGTGATGGTTGCCTCTCTCTACTGAAGAAGAGACGCTTAGATGGTATCCTGCCTCATGCGGTTGGTAAAAGGACTCCTCGTGTACCAGTTTCTTATTCTTACAAGAAAGATTATACAGAAAATTATGTTTCACCTTATAGAAGCCTGAAGTCAACTACTGATGCTAATGATGATGAAGTTGCACATGTTGTAGCTTTGGCCTTAACTGAAGCTGCACAAAGAGGAGGTTCTCCTCAAGTTTCTCAATCACCATGTAGAAGAGTAGAGCAAAAACCCTCACCTGTCCAGCGCTGGGAAAGAAAGCAGCAAATGTCAGAGACAGCTCGTGCCAAGTTTCAAAATCTTTCAGTGGATGAAGAGTTTTTGGAAGGTAGTACAGAAAGCAGGGATGCTGAAAATGGAGAATATGCAAGAGATAATAGTTCATTGATGGATGAAGGCACAGGTGCAATTGAATCTCTTCAGAAGGGGGGTAAATTTTATAGAAAGAGAGAGAGAGTGAGAACTGTTGGAAATCATCAGCTTGATGATGGTGGGGAGGCATGTAGTGGCACTGAAGAAGGTCTTAGCTTTAGTTCACTAAAGGAAAAGGTTGATATTGAGGTTACTAATGAAAAGCTTGAAATATTCTCTCCAAAAAATGGGAAGAAAAGAAACAAGAAACTCTTCTTTGGAGATGAAACCCCTGCCTTGAATGCATTGCAAACTTTGGCAGATCTGTCTCTAATGATGCCAATATCGACAATGGATTCTGAATCATCTATGCAGTTGAAGGGAGACAGAATAGCTGCTGATAAAGATAATAAGTCTGCTTTACCTGAAGCAACATCAACAAGCCATAAGAGACATAAACTTAAGCAGAGTGTGGTCCCTGAAATTGAGGTTTCAACCTCCAAAAAATCTAAACTTGGAAAGGAATTGACAAAGGATACGAATGCTCTCTCTGAGTCAAAAGAACAACTTCCTTTTGCTGATGCAACTTGGAAAAGAAAGCGGAAGTCTATGGTTTCTAAGGTTGCAAATTCAAAGCTTGAATCTTTTCCAAGTGGTCCCTTGAAAGATGAGGGCATAAATGCTTCAGCCCTTCCTGCCCTGAAAGCAAGACATGAGGAATGTTTCATATGTGAATAG 1839 0.4154 MRVSRQCVTLYLSLRKPDHSRLPLHLSCFSGNRNPTRRCIVNLPYPRGSMAPARKSRSVNKRISNSNDVSPEKDGVSSNKNKQRKKKLTDKLGSQWSKEELERFYEAYRMYGKDWKKVAGVVRNRSTEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLFVTAVLLPICNTPLLINLYGFCKLHLFSLPLMEESDSERESNDAPGSRKFVKRKREKIQLSVSKDQSHSIASSDGCLSLLKKRRLDGILPHAVGKRTPRVPVSYSYKKDYTENYVSPYRSLKSTTDANDDEVAHVVALALTEAAQRGGSPQVSQSPCRRVEQKPSPVQRWERKQQMSETARAKFQNLSVDEEFLEGSTESRDAENGEYARDNSSLMDEGTGAIESLQKGGKFYRKRERVRTVGNHQLDDGGEACSGTEEGLSFSSLKEKVDIEVTNEKLEIFSPKNGKKRNKKLFFGDETPALNALQTLADLSLMMPISTMDSESSMQLKGDRIAADKDNKSALPEATSTSHKRHKLKQSVVPEIEVSTSKKSKLGKELTKDTNALSESKEQLPFADATWKRKRKSMVSKVANSKLESFPSGPLKDEGINASALPALKARHEECFICE 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00051 612 Gene3D - 50 148 - -
Spst10g00051 612 FunFam Protein ALWAYS EARLY 3 isoform A 52 148 - -
Spst10g00051 612 ProSiteProfiles SANT domain profile. 91 128 IPR017884 -
Spst10g00051 612 PANTHER LIN-9 50 581 IPR010561 GO:0006351|GO:0017053
Spst10g00051 612 SMART sant 92 140 IPR001005 -
Spst10g00051 612 CDD SANT 96 130 IPR001005 -
Spst10g00051 612 MobiDBLite consensus disorder prediction 58 74 - -
Spst10g00051 612 MobiDBLite consensus disorder prediction 75 92 - -
Spst10g00051 612 MobiDBLite consensus disorder prediction 310 325 - -
Spst10g00051 612 Pfam Myb-like DNA-binding domain 94 131 IPR001005 -
Spst10g00051 612 MobiDBLite consensus disorder prediction 43 92 - -
Spst10g00051 612 SUPERFAMILY Homeodomain-like 90 139 IPR009057 -
Spst10g00051 612 MobiDBLite consensus disorder prediction 500 525 - -
Spst10g00051 612 MobiDBLite consensus disorder prediction 308 336 - -
Spst10g00051 612 MobiDBLite consensus disorder prediction 358 372 - -
Spst10g00051 612 MobiDBLite consensus disorder prediction 354 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00051 Spst-Chr10 574522 583259 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Spst10g00051 Myb_DNA-binding 1.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00051 - - gmx:100816217 837.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00051 10 574522 583259 Spst10g00051 10 574522 583259 ECH