Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst10g00051 | ATGAGAGTTTCGCGGCAATGCGTTACTCTCTATCTCTCTCTGCGTAAACCCGACCACTCTCGTTTGCCTCTTCATCTCTCGTGCTTCAGCGGGAATCGGAACCCTACAAGGCGGTGCATTGTGAATTTACCATATCCCAGGGGCTCAATGGCACCGGCAAGGAAATCTAGAAGTGTTAATAAGCGGATTTCAAATTCGAATGATGTTTCTCCGGAGAAAGATGGAGTTAGTTCTAATAAAAACAAGCAACGGAAGAAAAAGTTGACTGATAAATTGGGATCTCAGTGGAGCAAAGAGGAACTAGAGCGATTTTATGAAGCATATAGAATGTATGGGAAAGACTGGAAGAAGGTGGCTGGTGTTGTACGTAATAGATCCACTGAAATGGTAGAAGCTCTTTACAATATGAATCGGGCATACCTCTCTCTGCCTGAGGGCACGGCTTCTGTTGTTGGTCTCATAGCAATGATGACAGATCACTACAATGTGCTGTTTGTTACAGCTGTTCTGCTACCCATATGTAATACTCCTTTGCTCATAAACCTATATGGGTTCTGTAAGTTGCACCTTTTCTCTTTGCCCCTCATGGAAGAGAGTGACAGTGAAAGGGAGAGCAATGATGCACCAGGATCTCGGAAATTTGTAAAACGAAAGCGTGAAAAAATTCAGCTTAGTGTGTCTAAAGATCAGTCTCATTCAATTGCATCGAGTGATGGTTGCCTCTCTCTACTGAAGAAGAGACGCTTAGATGGTATCCTGCCTCATGCGGTTGGTAAAAGGACTCCTCGTGTACCAGTTTCTTATTCTTACAAGAAAGATTATACAGAAAATTATGTTTCACCTTATAGAAGCCTGAAGTCAACTACTGATGCTAATGATGATGAAGTTGCACATGTTGTAGCTTTGGCCTTAACTGAAGCTGCACAAAGAGGAGGTTCTCCTCAAGTTTCTCAATCACCATGTAGAAGAGTAGAGCAAAAACCCTCACCTGTCCAGCGCTGGGAAAGAAAGCAGCAAATGTCAGAGACAGCTCGTGCCAAGTTTCAAAATCTTTCAGTGGATGAAGAGTTTTTGGAAGGTAGTACAGAAAGCAGGGATGCTGAAAATGGAGAATATGCAAGAGATAATAGTTCATTGATGGATGAAGGCACAGGTGCAATTGAATCTCTTCAGAAGGGGGGTAAATTTTATAGAAAGAGAGAGAGAGTGAGAACTGTTGGAAATCATCAGCTTGATGATGGTGGGGAGGCATGTAGTGGCACTGAAGAAGGTCTTAGCTTTAGTTCACTAAAGGAAAAGGTTGATATTGAGGTTACTAATGAAAAGCTTGAAATATTCTCTCCAAAAAATGGGAAGAAAAGAAACAAGAAACTCTTCTTTGGAGATGAAACCCCTGCCTTGAATGCATTGCAAACTTTGGCAGATCTGTCTCTAATGATGCCAATATCGACAATGGATTCTGAATCATCTATGCAGTTGAAGGGAGACAGAATAGCTGCTGATAAAGATAATAAGTCTGCTTTACCTGAAGCAACATCAACAAGCCATAAGAGACATAAACTTAAGCAGAGTGTGGTCCCTGAAATTGAGGTTTCAACCTCCAAAAAATCTAAACTTGGAAAGGAATTGACAAAGGATACGAATGCTCTCTCTGAGTCAAAAGAACAACTTCCTTTTGCTGATGCAACTTGGAAAAGAAAGCGGAAGTCTATGGTTTCTAAGGTTGCAAATTCAAAGCTTGAATCTTTTCCAAGTGGTCCCTTGAAAGATGAGGGCATAAATGCTTCAGCCCTTCCTGCCCTGAAAGCAAGACATGAGGAATGTTTCATATGTGAATAG | 1839 | 0.4154 | MRVSRQCVTLYLSLRKPDHSRLPLHLSCFSGNRNPTRRCIVNLPYPRGSMAPARKSRSVNKRISNSNDVSPEKDGVSSNKNKQRKKKLTDKLGSQWSKEELERFYEAYRMYGKDWKKVAGVVRNRSTEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLFVTAVLLPICNTPLLINLYGFCKLHLFSLPLMEESDSERESNDAPGSRKFVKRKREKIQLSVSKDQSHSIASSDGCLSLLKKRRLDGILPHAVGKRTPRVPVSYSYKKDYTENYVSPYRSLKSTTDANDDEVAHVVALALTEAAQRGGSPQVSQSPCRRVEQKPSPVQRWERKQQMSETARAKFQNLSVDEEFLEGSTESRDAENGEYARDNSSLMDEGTGAIESLQKGGKFYRKRERVRTVGNHQLDDGGEACSGTEEGLSFSSLKEKVDIEVTNEKLEIFSPKNGKKRNKKLFFGDETPALNALQTLADLSLMMPISTMDSESSMQLKGDRIAADKDNKSALPEATSTSHKRHKLKQSVVPEIEVSTSKKSKLGKELTKDTNALSESKEQLPFADATWKRKRKSMVSKVANSKLESFPSGPLKDEGINASALPALKARHEECFICE | 612 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst10g00051 | 612 | Gene3D | - | 50 | 148 | - | - | |
Spst10g00051 | 612 | FunFam | Protein ALWAYS EARLY 3 isoform A | 52 | 148 | - | - | |
Spst10g00051 | 612 | ProSiteProfiles | SANT domain profile. | 91 | 128 | IPR017884 | - | |
Spst10g00051 | 612 | PANTHER | LIN-9 | 50 | 581 | IPR010561 | GO:0006351|GO:0017053 | |
Spst10g00051 | 612 | SMART | sant | 92 | 140 | IPR001005 | - | |
Spst10g00051 | 612 | CDD | SANT | 96 | 130 | IPR001005 | - | |
Spst10g00051 | 612 | MobiDBLite | consensus disorder prediction | 58 | 74 | - | - | |
Spst10g00051 | 612 | MobiDBLite | consensus disorder prediction | 75 | 92 | - | - | |
Spst10g00051 | 612 | MobiDBLite | consensus disorder prediction | 310 | 325 | - | - | |
Spst10g00051 | 612 | Pfam | Myb-like DNA-binding domain | 94 | 131 | IPR001005 | - | |
Spst10g00051 | 612 | MobiDBLite | consensus disorder prediction | 43 | 92 | - | - | |
Spst10g00051 | 612 | SUPERFAMILY | Homeodomain-like | 90 | 139 | IPR009057 | - | |
Spst10g00051 | 612 | MobiDBLite | consensus disorder prediction | 500 | 525 | - | - | |
Spst10g00051 | 612 | MobiDBLite | consensus disorder prediction | 308 | 336 | - | - | |
Spst10g00051 | 612 | MobiDBLite | consensus disorder prediction | 358 | 372 | - | - | |
Spst10g00051 | 612 | MobiDBLite | consensus disorder prediction | 354 | 380 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst10g00051 | Spst-Chr10 | 574522 | 583259 | Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Spst10g00051 | Myb_DNA-binding | 1.4e-08 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst10g00051 | - | - | gmx:100816217 | 837.795 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst10g00051 | 10 | 574522 | 583259 | Spst10g00051 | 10 | 574522 | 583259 | ECH |