Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00047 ATGGCTGATTTTTTGACCTCTACTCACCGGGCAAAGTGGATTTTCTCCTCTCATCAGCTGGTTGAAAAATATAAAGCTGCTAATCAGAGAGCCAAACAAATTCTAGAGAAGTATGGTGCAACTCTAATGGAAGTAGATATTGATGGATCGCTGTCATATCCAGAACCCCAGATGACGGTAAAGGACAGTGGTGAGAAGCATTCTCGGACAAAACCTCTTAGTATTGAAGAAGAACAATGCATACGAGTATTTTTTGAAAACAAGCTACAAGAAGTATGTAACAATTTCCGCTTCCCTCACAAGATCCAGGCAACGGCCCTTATCTATTTTAAAAGATTCTATCTGCAATGGTCGGTGATGGAACATCAACCAAAACATATTATGTTGACCTGCATATATGCTGCTTGTAAGATAGAAGAAAATCATGTGTCGGCTGAGGAGCTTGGTAAGGGGATTTCACAGGATCATCAAATGATTCTCAATAATGAGATGATAGTTTATCAGAGTTTGGAATTTGATCTAATTGTTTTTGCACCATATCGCGCGGTTGAAGGTTTTATAAATGATATGGAGGAATTCTGCAGTGCTGGTGATGATCAGCTTCAAATGCTCGAGACTTTGCAAAAGACAGCAAGATCGGAACTTGATAAAATGATGCTTACAGATGCACCACTTTTATTTCCTCCTGGGCAGTTAGCCTTGGCTGCTTTGGGCAACTCAAATGCAGTGCATAAAGTCATTGACTTCGATAGTTATCTTGAGAGCATTTTTTCCCGTCAGAATTGGACGCATACAATGACCGAGCTTACTGAATCACTACATGCAATTGATTCTTGTGTTAGAAAATACAAAATTTCTTCCGAGAAGGAATTGAAACATATCAACCGAAAACTGAAGGCTTGTTGGGGTCATAACTCTCATGACGAGTACTTTCTTTAA 939 0.394 MADFLTSTHRAKWIFSSHQLVEKYKAANQRAKQILEKYGATLMEVDIDGSLSYPEPQMTVKDSGEKHSRTKPLSIEEEQCIRVFFENKLQEVCNNFRFPHKIQATALIYFKRFYLQWSVMEHQPKHIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQSLEFDLIVFAPYRAVEGFINDMEEFCSAGDDQLQMLETLQKTARSELDKMMLTDAPLLFPPGQLALAALGNSNAVHKVIDFDSYLESIFSRQNWTHTMTELTESLHAIDSCVRKYKISSEKELKHINRKLKACWGHNSHDEYFL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00047 312 FunFam cyclin-H1-1 63 175 - -
Spst10g00047 312 Gene3D - 177 282 - -
Spst10g00047 312 SMART cyclin_7 87 168 IPR013763 -
Spst10g00047 312 Pfam Cyclin C-terminal domain 179 279 IPR031658 -
Spst10g00047 312 CDD CYCLIN_AcCycH_rpt1 3 174 - -
Spst10g00047 312 Gene3D - 63 175 - -
Spst10g00047 312 Pfam Cyclin, N-terminal domain 88 174 IPR006671 -
Spst10g00047 312 PANTHER CYCLIN 66 272 IPR043198 GO:0006357|GO:0016538
Spst10g00047 312 FunFam Cyclin h 177 282 - -
Spst10g00047 312 CDD CYCLIN_AcCycH_rpt2 177 304 - -
Spst10g00047 312 SUPERFAMILY Cyclin-like 61 176 IPR036915 -
Spst10g00047 312 SUPERFAMILY Cyclin-like 179 305 IPR036915 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00047 1 280 Core Cell Cycle Gene Families AT5G27620 65.714 1.48e-133 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00047 K06634 - gmx:547736 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00047 10 522394 525747 Spst10g00047 10 522394 525747 ECH