Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00037 ATGATCGAGTCTCTTTTTGGTTACAACTTGCAATCAATTAAGAACGAGGAAACAAAGAGTAAAACCCCGTCTCCTAGCAAGCATGTACTTGAGCCAAAGCGCCTGCAGAACATAACTATACTCTCTAAAGCTCTGAATGCGACAGCTGAGCATGTCTGCGAGGCCTTAATGCAAGGGAAGGGGTTGTCTTTGCCCCAACTAGAGGCACTTGTGAAGATGGTACCCACCAAGGAAGAAGAATCCAAGCTCTTCAATTATAAAGGTGACATCAATGAATTGGGGTCCGCCGAAAGGTTCGTGCGAGCAATGCTTGACGTGCCATATGCCTTTCAAAGAGTAGAAGGCATGCTTTTTAGAGAGACATTTGACGATGAAGTAGTTCACCTCAGGAACTCGTTTTCAATGCTTGAGGAAGCATGCAAGGAACTACGATCAAGCAGGCTCTTCTTAAAATTACTAGAAGCAGTGCTCAAAACGGGAAACCGTATGAACGTTGGAACAATCAGAGGGGGTGCTAGAGCATTTAAGCTCGATGCCCTTCTCAAGCTTGCAGATGTTAAGGGAACTGATGGGAAAACCACGTTGCTCCATTTTGTTGTTCAGGAGATTGTTCGTTCGGAAGGAATAAGAGTTTCAGATAGCATTATGGGAAAAATCAGCCAGAGAAGTAAGAACAGAACGGAGGAAGAGAAGGAAGAAGATTACAAAAGAATGGGACTAGAACTTGTTTCTGGTCTCAGCACTGAGTTGTACAACGTGAAGAAAACAGCTACAATTGACTTGGATGTTCTTGCGAGCTCTGTGTCGAACCTATCGGAAGGAATGAAAGAGCTGCAACATCTAGTGGAGAAGGAACTGCATAAAGATGAGAGAAGCATAAACTTTGTGCAGTGTATGAAGTCATTCCTGAACTATGCTGATGCAAACTTGAAGGAGTTGCGAGGAGATGAAGATAGAGTATTGGCACGTGTGAAAGAAATCACTGAATATTTTCATGGGGATGTGAGCAAAGAAGATGCAAATCCTTTAAGGATATTTATGATTGTGAGAGATTTTCTGGGGATGTTAGATAATGTGTGTAAAGAACTTAGAAAGTCTAAAGCTCCACGAAGTCCAAACCCTCTTGCTATGCTCCCTTTAGATAGATCATAA 1152 0.4262 MIESLFGYNLQSIKNEETKSKTPSPSKHVLEPKRLQNITILSKALNATAEHVCEALMQGKGLSLPQLEALVKMVPTKEEESKLFNYKGDINELGSAERFVRAMLDVPYAFQRVEGMLFRETFDDEVVHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGIRVSDSIMGKISQRSKNRTEEEKEEDYKRMGLELVSGLSTELYNVKKTATIDLDVLASSVSNLSEGMKELQHLVEKELHKDERSINFVQCMKSFLNYADANLKELRGDEDRVLARVKEITEYFHGDVSKEDANPLRIFMIVRDFLGMLDNVCKELRKSKAPRSPNPLAMLPLDRS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00037 383 SUPERFAMILY Formin homology 2 domain (FH2 domain) 28 367 - -
Spst10g00037 383 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 382 IPR015425 -
Spst10g00037 383 Gene3D Formin, FH2 domain 1 372 IPR042201 -
Spst10g00037 383 PANTHER FORMIN-RELATED 1 370 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Spst10g00037 383 SMART it6_source 2 371 IPR015425 -
Spst10g00037 383 Pfam Formin Homology 2 Domain 3 356 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00037 Spst-Chr10 398866 400638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00037 1 376 FH2 protein (formin) Gene Family AT3G05470 74.142 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00037 - - gmx:100793761 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00037 10 398866 400638 Spst10g00037 10 398866 400638 ECH
Spst6g00322 6 3178229 3179731 Spst10g00037 10 398866 400638 PCT