Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00036 ATGGGTTGTGGTTCTGAGCATTTTTCCATGATCTTCATCATCACCCTCTTGATGCTCCTATCATCACAAAGCACCCTCATTTTGACTGTGGCGGGTTCTCTGTTGAATGCAGTTGGAAACTTCCAAGTTCGTGGCCTACCAGAGATGTATTTCATTCAAGAGAATGATGAAAAGGAGATTAAGAAAATCTCAGGACGGGATGAGAATGAAGAGAAGCAAGGTTTGATAGTGGACAAGTTTAGATCCTTGCTTGGACTCAAGAGTTTCCACACCAAAGTACCGTCTAATGGTGACTTGGACTTTCTCTCTCCCTCACCTTGTCCAGCACCCCTCATGGAAGAAGCTCAGGCTCCACCTCCTTCTCCTTCTCCACTTCCACACGTGCACCTTCATTCCCATCATCCACGGCATCATAAGAATCCACCGCTTCACCAAACTCATCAAGAAGATAGAGGCAAGGCCAAAAGAATACTAATAGCTGTTCTTGTATCTGCCGGGGTTGCTACGTTGATTGGTGCTTGTGGATTATTCTTGGTGTGGAGGAAATTCTCAAATCACACAAAGAAACGCAAAAGAACAATGCCACTATATAGCAAGAGCAAGGGAAGTGGAGGTACTTATCAAAGTTCATCAAGCAAGGTGAGTTTAAACTCAGGAGTAGATCTGTTTTATCTTAATGCTTTAGGCGAGGACATAGAGCAACACGCTTGCACCTTGAAAAAGACTTGCAAGGATGGTTTAGAGTATGATAATGTCAACGGTTCTTCCACGAAGGAAATTGCATCTGTTCATGAAGATGCAGAATCAGTGAAAGGTGAAGCTGAATCTGATGGCGGCAACTCTTCTTCTGGGGATAAGATTATCCCTGAAGATTGCCATTCATCAGACGATGAAAGTTTTCATTCCTTTGTCGATTCGCACTCAAATAATAGACTTTCCAATGCTTCAGCTTGTAGCCTTAGTGACACAAACTCTCTGTCCCGTCAAAATTCAAGTTCAATACCAAACCAATTCCCCAGCTCTCCACATAACTCAATCTCAAGTAAACAATCTCACCAACCATCAAATAGTGAAAAACATGAAGAGAAAGAGACTGAGACCACTCACCAATGTTCAAAAATATTTACTTCCCCTCCTCCACCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCACCACCACCACCTCCACCAATGCAAATGCCATTATTTTCTTTGCATTCTCTCAATTCTTCTAGAGTCTCCTCTCATTCCCCACTTTCTTTGACATCTAATAATTTATCATCTCCGGTAAATTCGGACACTTCCTCAAGTTCAAATCAAAGTCCAGAAAAGGAGTTGCCTTCTACACCCGAACCCTACCCTACACATTCTCCTCCCAAGATCCCTCCACCACCATGCCCACCTCCATTTCTTAAAGGAAATATTAACAGTGCCAAAACCCCACCTCCTCCACCATCTCAACTCCCTCAATTTACCCCACTTGGTAAAGATGGTGCACCATTGCCAAAACTAAAACCTCTTCACTGGGATAAAGTAAGAGCCGCACCAAATCGCACAATGGTTTGGGATAAACTACGATCAAGCTCATTCGAGTAA 1596 0.4361 MGCGSEHFSMIFIITLLMLLSSQSTLILTVAGSLLNAVGNFQVRGLPEMYFIQENDEKEIKKISGRDENEEKQGLIVDKFRSLLGLKSFHTKVPSNGDLDFLSPSPCPAPLMEEAQAPPPSPSPLPHVHLHSHHPRHHKNPPLHQTHQEDRGKAKRILIAVLVSAGVATLIGACGLFLVWRKFSNHTKKRKRTMPLYSKSKGSGGTYQSSSSKVSLNSGVDLFYLNALGEDIEQHACTLKKTCKDGLEYDNVNGSSTKEIASVHEDAESVKGEAESDGGNSSSGDKIIPEDCHSSDDESFHSFVDSHSNNRLSNASACSLSDTNSLSRQNSSSIPNQFPSSPHNSISSKQSHQPSNSEKHEEKETETTHQCSKIFTSPPPPPPPPPPPPPPPPPPPPMQMPLFSLHSLNSSRVSSHSPLSLTSNNLSSPVNSDTSSSSNQSPEKELPSTPEPYPTHSPPKIPPPPCPPPFLKGNINSAKTPPPPPSQLPQFTPLGKDGAPLPKLKPLHWDKVRAAPNRTMVWDKLRSSSFE 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00036 531 ProSiteProfiles Formin homology-2 (FH2) domain profile. 494 531 IPR015425 -
Spst10g00036 531 MobiDBLite consensus disorder prediction 111 126 - -
Spst10g00036 531 MobiDBLite consensus disorder prediction 375 401 - -
Spst10g00036 531 MobiDBLite consensus disorder prediction 262 505 - -
Spst10g00036 531 MobiDBLite consensus disorder prediction 403 446 - -
Spst10g00036 531 MobiDBLite consensus disorder prediction 354 369 - -
Spst10g00036 531 MobiDBLite consensus disorder prediction 109 151 - -
Spst10g00036 531 MobiDBLite consensus disorder prediction 305 353 - -
Spst10g00036 531 MobiDBLite consensus disorder prediction 447 471 - -
Spst10g00036 531 MobiDBLite consensus disorder prediction 199 213 - -
Spst10g00036 531 MobiDBLite consensus disorder prediction 289 304 - -
Spst10g00036 531 PANTHER FORMIN-RELATED 410 531 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Spst10g00036 531 MobiDBLite consensus disorder prediction 190 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00036 Spst-Chr10 397190 398785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00036 479 531 FH2 protein (formin) Gene Family AT3G05470 79.630 1.32e-20 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00036 - - gmx:100811929 708.368