Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00018 ATGGGACATATTTCATCTGCGTTCAATAGGTTGGCAAAGTCCTTCGCAACGAAGAAAGGTGGGAGTTCGGATGGATGCAACGGAAGAGAAGCTGCGGAAGCAATGGCAAAGGAAGCCAAAAAAAATCACTTCATATTGCATAGCTCCGGCACCATTAATGTTGATGGTTCAAACAACTCTGTCTCACTTTTCTCCAAAAAAGGCAAGAAAGGGGTCAATCAGGATTGCTGCGTAGTGTGGGAAGAATTTGGGTGCCAAGAGGACATGATCTTCTGTGGGATTTTTGACGGGCACGGGCCATGGGGTCACTTCGTGGCTAAAAGAGTAAGAAAGTCAATGCCACCATCTTTGCTATGCAACTGGCAGGAGACACTTTCTCAAACTGCACTTGATCCAGATGTTGATGTTGATATAGAGACAGAGAAAAAGCAACACCGGTTTAATATATGGAAGCACTCTTACTTGAAGACTTGTGCTGCCATTGATCGAGAACTAAAGCAGAATCGCAAGATAGATTCATTTTTCAGCGGAACAACTGCCTTGTCCATTGTGAGACAGGGTGAACTCATAGTAATTGCAAACGTTGGTGACTCTCGTGCTGTATTAGCCACAGCATCAGATGATGGAAATTTAGTAGCAGTTCAGTTGACTGTAGATTTCAAGCCCAATTTACCTCAGGAAGCAGAGAGAATACTGGAGTGCCAAGGACGAGTGTTCTGCTTAGAAGACGAGCCCGGGGTGCACAGGGTGTGGTTGCCGGATGAGGAGTCTCCAGGACTTGCCATGTCAAGGGCTTTTGGTGACTACTGCGTCAAAGAGTATGGTCTTATATCAGTCCCTGAGGTAACACACAGGAACATAACCAGCAAAGACCAGTTTGTTGTGCTAGCCACTGATGGGGTGTGGGATGTAATCTCTAATCAAGAAGCAGTGGACATTGTGTGTTCAACGGCAGACAGAACAGATTCTGCCAAACATTTGGTGGAGTGTGCAATGCGTGCATGGAAACGCAAGAGGAGGGGCATTGCAATGGATGATATTTCAGCTATTTGTCTCTTCTTTCACTCTTCACCGTCACTTGACCAAGTTGATGCCACCCTAGAATAG 1107 0.458 MGHISSAFNRLAKSFATKKGGSSDGCNGREAAEAMAKEAKKNHFILHSSGTINVDGSNNSVSLFSKKGKKGVNQDCCVVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRKSMPPSLLCNWQETLSQTALDPDVDVDIETEKKQHRFNIWKHSYLKTCAAIDRELKQNRKIDSFFSGTTALSIVRQGELIVIANVGDSRAVLATASDDGNLVAVQLTVDFKPNLPQEAERILECQGRVFCLEDEPGVHRVWLPDEESPGLAMSRAFGDYCVKEYGLISVPEVTHRNITSKDQFVVLATDGVWDVISNQEAVDIVCSTADRTDSAKHLVECAMRAWKRKRRGIAMDDISAICLFFHSSPSLDQVDATLE 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00018 368 PANTHER PROTEIN PHOSPHATASE 46 352 IPR015655 GO:0004722|GO:0006470
Spst10g00018 368 ProSiteProfiles PPM-type phosphatase domain profile. 60 354 IPR001932 -
Spst10g00018 368 FunFam Probable protein phosphatase 2C 34 51 356 - -
Spst10g00018 368 CDD PP2Cc 59 354 IPR001932 -
Spst10g00018 368 Gene3D - 45 356 IPR036457 -
Spst10g00018 368 Pfam Protein phosphatase 2C 84 330 IPR001932 -
Spst10g00018 368 SUPERFAMILY PP2C-like 57 356 IPR036457 -
Spst10g00018 368 SMART PP2C_4 51 352 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00018 Spst-Chr10 204827 206571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00018 1 355 PP2C-type Phosphatase Gene Family AT3G05640 70.588 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00018 - - gmx:100793051 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00018 10 204827 206571 Spst10g00018 10 204827 206571 ECH
Spst1g02305 1 31763640 31766258 Spst10g00018 10 204827 206571 PCT
Spst6g00253 6 2584351 2585598 Spst10g00018 10 204827 206571 PCT