Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00013 ATGGCGTCAGAGCTAGCCTTGCCGTTCTCTGTTGTATCTGTGGTAGAAGATATTCTTCAGACGCATGGAAGCCGTTTAAGCGACATTGACTTGGCGTCAAGGAAGGCTGAAGAAGCTTCCTCAAGAAGGAATGAAGCAGCTAGCTGGCTGAGAAAGATAGTTGGAGTTGTTGGAGGGAAAGACATGCCAGATGAACCTAGTGAAGAAGATTTCAGGATTGCATTGCGTAGTGGCATTGTCCTTTGCAATGCTCTTAACAAAATTCAACCCGGAGCAGTGCCCAAGGTAGTTGAAGTTCCCTGCGATAGTGTTATCATTCCTGATGGGGCAGCTCTGTCTGCTTACCAATACTTCGAAAATGTAAGGAATTTTCTGGTATCTATGGAGGAAATGGGGCTTCCCACCTTTGAAGTTTCTGATTTGGAACAGGGAGGACAATCTTCGAGGATAGTGAATTGTGTTTTAGCACTGAAGTCTTACAGTGAATGGAAGCTTGGAGGAAAAAATGGGTCATGGAAATATGGTGGGAGTCCAAAGCCACCAACCAATGCTAAACCACCTATTCTGAGGAGACACTCAGAACCATTCATGAGGTCTTTGTCAAAGGGTATTACGTTAGGAGATAAAGATGGGTTACTGAGTGATATTTCTTCAATCAGTGAAGTGGGGCCTGATCTCAGTGAAGGGGGTTCTATTCCCTCCTTGAATTTACTAATTCGTGAAATTTTATCTGATAAGAAGCTAGAAGAAATTCCCTCTGTGGTAGAGTCTCTACTTAGCAGAGTCATGGAGGAGTTTGAACAACGCTTGCTAATGCAACAAGAAATGTTCAAAACAACTCAAGACTATAAGGCACTACCTGAAGCAGAGGATTCCAATGTGAAATCTGCTAGTGACGGTGAAGAGATGGAAGAAGATGAAGATGTGGATGTTAAAGAAAAAGAATGTGATGATGTGAAGTACAATGTCGACGAAGAACCAAGCAGCCAACATTTGAAGCAACGAGAGTTACTTCAGCAGCAAAATGAGAACGTCGAGGAATTGAAAAAGATGGTTCATCAAACGAAAACAGGAATGCAGGTTCTGCAACATAAATACCAGGAGGATATGATCTATATAAGTGAACACCTGCAAGGCCTAGCTTCTGCTGCTTCAGGATATCAGAAAATTCTTGAAGAAAACCGCAAGTTATATAATCAATTGCAAGACCTGAAAGGAAATATTAGGGTGTACTGTAGAGTTCGTCCCTCAACAGGTCCCCAACCAGATCATCATTGCCCTGTCAGTAACATAGATGAAGGAAGTATCTCACTCTCAATACCTTCCAAAAACGGGAAAGACGGGAAGAAGACGTTTAACTTCAACAGAGTTTTTGCGGAGGTTTTCTCAGATACACAACCACTGATTCGTTCGGTTCTTGATGGCTACAACGTGTGTATATTTGCTTATGGCCAGACAGGGTCAGGAAAAACACACACTATGTCTGGACCAGACAATTATACTGAGGAAACAGTAGGTGTCAACTACCGCGCACTGAAAGATCTTTTCCATCTCTCAGAACAGAGAAAAGACACCATCCACTATGATATATCTGTTCAGATGCTTGAGATTTACAATGAACAAGTCAGAGACCTATTGGCGACAGACGAAATTCGCAACAGTTCCCATAATGGCATTAATGTGCCAGATGCAAACCTTGTTCCTGTTTCATCCACTTCCGATGTCTTAAATTTAATGAACTTGGGACAAAAGAACCGGGCAGTTAGTGCTACTGCCATGAATGATCGGAGTAGTCGTTCTCACAGCTGCTTGACAGTTCATGTTCAAGGAAGAGAGTTTGCATCAGGGAATAGTCTTCGTGGTTGTATCCACTTAGTTGACTTGGCAGGAAGTGAGAGAGTTGATAAATCTGAGGTCACAGGAGATAGGCTAAAGGAGGCTCAACATATTAACAAGTCACTTTCTGCTCTAGGAGATGTAATTGCTTCACTTGCCCAAAAGCAATCACACGTTCCTTATAGGAACAGCAAACTTACTCAGCTACTTCAAGATTCTCTTGGAGGCCAAGCAAAGACACTCATGTTTGTTCATGTTAGTCCGGAGCCAGATGCCATTGGAGAAACAATTAGTACATTGAAGTTCGCAGAAAGGGTATCCACGATTGAACTTGGTGCTGCACGAGTTAACAAAGATAGTCCAGAGGTCAAAGAGCTTAAAGAACAGATTGCAAGTCTGAAGGCAGCCTCAGCCAGGAAGGATGGAGAATTGGAACAATTTTATCAGTTTGCAAATAGCATTACTGAAACTCCTAAGTCCAAATCTCAAGTGTCTTCCATTGCACGGTCACCTACTTCGTCTTATGGAAGTCGGAAGCCACCAAGAGAAGATTCTATTAGCATGGTGGAGGACAAGAAAAAGGCTAGCCCCAAGCTCAAGGAAAGACGAAGCCTTGATCCCTTGTACATTAGTAGGAATTCATTACCTTGGCCACATCATGCTGAGGTAAATGGAAATGAGGATGATAAGGAATCGATTTCTGGGGATTGTATTGGTAAGAGTAGAAAAAGGAATGGCCGCTTAAGTACTGAAAATAACATCGTGGGAGAGTTTGACACAGAAAGCAAACGGTCATCTTCTCCTATGCTAAGTCCCGCGTTTCTTTTAGACCCTTCCAAAATATGCATGGAGGTGGCCACCACAAATGACTCTGATGACCTTGAGTTTGCAGCAAGTGAAAGTTCAGAATCAGATAAGAGTTGGCAATCACATGCACACATGCCTAAAATAACCTCTCTTTCCAACGGAGTAGTAGCTAAAACTAAGAAACCAGCACATCCAAGACAAGCTAAGAACCAAGAAAACAGGAGTGTGATCTTGTCTTCTTCATCACCAAGGAGACAATCCACCGTAGTTAGTCAACAGAGAAAGCATCTAGATGCAAAAAGAACCGGAAATGCTAAATGA 2964 0.4258 MASELALPFSVVSVVEDILQTHGSRLSDIDLASRKAEEASSRRNEAASWLRKIVGVVGGKDMPDEPSEEDFRIALRSGIVLCNALNKIQPGAVPKVVEVPCDSVIIPDGAALSAYQYFENVRNFLVSMEEMGLPTFEVSDLEQGGQSSRIVNCVLALKSYSEWKLGGKNGSWKYGGSPKPPTNAKPPILRRHSEPFMRSLSKGITLGDKDGLLSDISSISEVGPDLSEGGSIPSLNLLIREILSDKKLEEIPSVVESLLSRVMEEFEQRLLMQQEMFKTTQDYKALPEAEDSNVKSASDGEEMEEDEDVDVKEKECDDVKYNVDEEPSSQHLKQRELLQQQNENVEELKKMVHQTKTGMQVLQHKYQEDMIYISEHLQGLASAASGYQKILEENRKLYNQLQDLKGNIRVYCRVRPSTGPQPDHHCPVSNIDEGSISLSIPSKNGKDGKKTFNFNRVFAEVFSDTQPLIRSVLDGYNVCIFAYGQTGSGKTHTMSGPDNYTEETVGVNYRALKDLFHLSEQRKDTIHYDISVQMLEIYNEQVRDLLATDEIRNSSHNGINVPDANLVPVSSTSDVLNLMNLGQKNRAVSATAMNDRSSRSHSCLTVHVQGREFASGNSLRGCIHLVDLAGSERVDKSEVTGDRLKEAQHINKSLSALGDVIASLAQKQSHVPYRNSKLTQLLQDSLGGQAKTLMFVHVSPEPDAIGETISTLKFAERVSTIELGAARVNKDSPEVKELKEQIASLKAASARKDGELEQFYQFANSITETPKSKSQVSSIARSPTSSYGSRKPPREDSISMVEDKKKASPKLKERRSLDPLYISRNSLPWPHHAEVNGNEDDKESISGDCIGKSRKRNGRLSTENNIVGEFDTESKRSSSPMLSPAFLLDPSKICMEVATTNDSDDLEFAASESSESDKSWQSHAHMPKITSLSNGVVAKTKKPAHPRQAKNQENRSVILSSSSPRRQSTVVSQQRKHLDAKRTGNAK 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00013 987 SMART kinesin_4 405 729 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst10g00013 987 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 407 757 IPR027417 -
Spst10g00013 987 Gene3D Kinesin motor domain 348 723 IPR036961 -
Spst10g00013 987 Pfam Calponin homology (CH) domain 41 162 IPR001715 GO:0005515
Spst10g00013 987 Coils Coil 328 358 - -
Spst10g00013 987 Gene3D - 32 162 IPR036872 -
Spst10g00013 987 MobiDBLite consensus disorder prediction 907 987 - -
Spst10g00013 987 SMART ch_5 42 160 IPR001715 GO:0005515
Spst10g00013 987 CDD KISc_C_terminal 405 723 - -
Spst10g00013 987 ProSiteProfiles Kinesin motor domain profile. 407 721 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst10g00013 987 MobiDBLite consensus disorder prediction 770 792 - -
Spst10g00013 987 Coils Coil 387 407 - -
Spst10g00013 987 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Spst10g00013 987 PRINTS Kinesin heavy chain signature 671 692 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst10g00013 987 PRINTS Kinesin heavy chain signature 622 640 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst10g00013 987 PRINTS Kinesin heavy chain signature 475 496 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst10g00013 987 PRINTS Kinesin heavy chain signature 591 608 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst10g00013 987 MobiDBLite consensus disorder prediction 795 819 - -
Spst10g00013 987 Pfam Kinesin motor domain 434 721 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst10g00013 987 MobiDBLite consensus disorder prediction 950 974 - -
Spst10g00013 987 MobiDBLite consensus disorder prediction 770 885 - -
Spst10g00013 987 MobiDBLite consensus disorder prediction 285 299 - -
Spst10g00013 987 CDD CH_AtKIN14-like 42 159 - -
Spst10g00013 987 SUPERFAMILY Calponin-homology domain, CH-domain 39 172 IPR036872 -
Spst10g00013 987 Coils Coil 735 755 - -
Spst10g00013 987 FunFam Kinesin-like protein KIN-14I isoform A 402 763 - -
Spst10g00013 987 MobiDBLite consensus disorder prediction 860 881 - -
Spst10g00013 987 MobiDBLite consensus disorder prediction 285 312 - -
Spst10g00013 987 MobiDBLite consensus disorder prediction 923 937 - -
Spst10g00013 987 FunFam Kinesin-like protein KIN-14I isoform A 27 179 - -
Spst10g00013 987 MobiDBLite consensus disorder prediction 834 859 - -
Spst10g00013 987 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 962 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00013 Spst-Chr10 168198 174309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00013 395 755 Calmodulin-binding Proteins AT5G65930 40.426 2.32e-73 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00013 K10406 - gmx:100808197 1438.71