Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00007 ATGGTATCAAATAATAGCCAATCTCTCGAGGGGAATGAAAGTGGTGAGGACAGGGGTCATAGAATTCCAACTATGAAATCTAGGCAGATACATATTGGTTCAAAAAATGCACCTCTTAGGTACTTGCCATTTGTATCTCTTGTTATGGTGTCGTTGGCTGCAAACTCTAAGTTTGATTTCTTTTTTCGGCTGTTGTGCAGTGGGAGTGGCCTTAGAAATGTGATAAAAGGGGTGTGGACCAAGGACTACGAGTTGTACTTTGAACGTTTCCTTCGAAGAGTGGTACGAGAGGAGGTGGAACGTTCAATCCAAGATTACTTACCTCCAAGTGCACGGGTTAATGAGATTGGCAGTGACACGTCTAGAGCAACACTCTTTGAATTGCGTTTCACTAATAAATTGCCTAATATATTTTTTACCCACTCTAACATGATATCAGAGGATAAAACACCCATTCAAATTGCTCTCTTTGATGTTAGAGATCAGTCAGTGGTTAACGTTGGTCCCCTCTCTTCTGTAAAGGTAGAGATCTGTGCCCTCAATGGCGAGTTCGGATTCAATGGAAATGAGAATTGGACTGAAAGTCAGTTCAATGCCAATATCTTGCGTGAGAGAGATGGCCGAAGGCCATTATTGAATGGAGACAGATTTATTACTTTGAAAAATGGAGTAGGTTGTTTCAATAGAGTTATGTTCACAGATAATTCACGGTGGATAAGAAGCAGAAAGTTTAGGTTGGGAGCCAAAGTTATCCAGCCAACTTCTGATGAAGCTAACATTAAGGAAGGTAGAAGCGAACCTTTTGTGGTTAAAGATTACAGAGGAGAGTCGTACAAGAAACACCACCCTCCTTCCCTGAACGATGATGTTTGGCGTTTAGAGCAAATTGCCAAAGATGGAAAATTTCACGAGAGGCTGTCTCTCCATGGAATTCACACTGTGAAGGATCTCTTGCGGTTATACACAATAAATCCCTCTTCACTACTTGAGGTTGGCAACATTCCAAAGAGGTCATGGATGTCAATTATTGAACATGCCAAGACTTGTGTGATAGATGACGACGAGACTCTCGTATACCACACAGCAGAACAATCGACAAGCTTGTTTTTCAATTCCATCTATGTCCTTGTGGGTGTGACTTTTGATGGGAAAAATTATCTATCCCCTGATACTCTTACCCCCAGTGAGAAGGGTGTGGTGGAAATATTGAAGCAACATGCTTACCAAAATATGGAAAATTTCAAATCAATTCATGAGACATCATTGAGCTGCTTAAGATCATTGGCATGTCTAGGAGTGGGGCACTCTGATGCTGCAGAGCATGGTCTGCAACAGTTAAACATCTCTACAGAACAAGAAGGAACATGGGCTGGTTATGGCCAACCAAATCCCTCAACTTCATATATAGATGAAGGTGTACATAATTACCAAATCTATGTTGATCCAGATTCAGTGCCAGACATAACAGACATGCCACTCAACAATCCCTATGTCAACGATTCGTTGGAGGAGTACACAAAGGATTTTGGCTCTGGATCGTGCGTTGAAGAGGATAATTGGGTCCCTTTTGGATAA 1575 0.4159 MVSNNSQSLEGNESGEDRGHRIPTMKSRQIHIGSKNAPLRYLPFVSLVMVSLAANSKFDFFFRLLCSGSGLRNVIKGVWTKDYELYFERFLRRVVREEVERSIQDYLPPSARVNEIGSDTSRATLFELRFTNKLPNIFFTHSNMISEDKTPIQIALFDVRDQSVVNVGPLSSVKVEICALNGEFGFNGNENWTESQFNANILRERDGRRPLLNGDRFITLKNGVGCFNRVMFTDNSRWIRSRKFRLGAKVIQPTSDEANIKEGRSEPFVVKDYRGESYKKHHPPSLNDDVWRLEQIAKDGKFHERLSLHGIHTVKDLLRLYTINPSSLLEVGNIPKRSWMSIIEHAKTCVIDDDETLVYHTAEQSTSLFFNSIYVLVGVTFDGKNYLSPDTLTPSEKGVVEILKQHAYQNMENFKSIHETSLSCLRSLACLGVGHSDAAEHGLQQLNISTEQEGTWAGYGQPNPSTSYIDEGVHNYQIYVDPDSVPDITDMPLNNPYVNDSLEEYTKDFGSGSCVEEDNWVPFG 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00007 524 Pfam Calmodulin binding protein central domain 285 349 IPR046830 -
Spst10g00007 524 Pfam Calmodulin binding protein C-terminal domain 358 416 IPR046829 -
Spst10g00007 524 PANTHER OS02G0177800 PROTEIN 88 465 IPR012416 GO:0005516
Spst10g00007 524 Pfam Calmodulin binding protein-like N-terminal domain 127 272 IPR046831 -
Spst10g00007 524 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00007 Spst-Chr10 108134 110557 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00007 71 430 Calmodulin-binding Proteins AT5G26920 41.033 5.24e-84 265