Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06492 ATGGCTTCCCGTTATGATTTAATCTGTAATGTGAATGGAGGCTCTGAGCATAAGATATGGAGAATTAAAGTCAGAGTCATTAGGCTATGGAGGTCTTCATATTTTAAGGATAACAATAATAAACCAATGATTGAATTGGTTGTTTTAGACGAACATGGAGGTCGTATCCAATGCACGGTGAAGAGCATTCATGTGTATCTGTTTGAGAATAGTATCAACGAAGGTAATGTGTACATGCTAGAAAACCTCAGCGTTGCACTTAACAGTGGAAAGTACAAACCTACAATGCATGAATTTAGAATGTTCTTCAAGAGAGAGACACGAGTTACTCTGGTAGAAGATTCTTTCATTCCCCTCTATGGTTTTTCATTTGTCCCATTCGTTGAAAAATTGAATGAAACTAAGGACGACAGACGTTTGGTTGGTAAGTTTTATTTACACTATGTTTAA 450 0.3644 MASRYDLICNVNGGSEHKIWRIKVRVIRLWRSSYFKDNNNKPMIELVVLDEHGGRIQCTVKSIHVYLFENSINEGNVYMLENLSVALNSGKYKPTMHEFRMFFKRETRVTLVEDSFIPLYGFSFVPFVEKLNETKDDRRLVGKFYLHYV. 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06492 149 Pfam Domain of unknown function DUF223 45 129 IPR003871 -
Seca9g06492 149 Gene3D - 8 115 IPR012340 -
Seca9g06492 149 SUPERFAMILY Nucleic acid-binding proteins 15 114 IPR012340 -
Seca9g06492 149 CDD RPA1_DBD_A_like 21 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06492 Seca-Chr9 182809685 182810222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g06492 20 129 Core DNA Replication Machinery Family AT5G08020 28.319 4.58e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06492 - - adu:110274503 166.007