Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06469 AAAAAACCTATCTTGTTTCTCCCGAGGGGAGGGATCAGTGAAACTGAAACCTATCTTCTTTTCTTCCATTCTTCTGTTTCTTTCTGTTACAGTTATCTATCTTCTTCTATATTGGCGAATAACATGTTAGCTTCCACTCTCCTAACACCTTCTAACCTCAACCCTTCCCATTTCCTCCCTCCAACCACCAGACTTTCAGAATTCCTTCCACGAAGCAGAGTCGCATTCTCTTCCAAATCAAACACCAAAATTTCCCTCGTTGTTAGGCTCAGTACCAACGGTCACGACGGTGCCGTTGATGCTACCTCGCTTCAGGGCATTGATGCAGTAGAAAGTGAATCTTCTGGTCTAGGTGATGGTTATGTGGCCTTGTTTGTTCGTATGTTAGGCCTTGATCGTGATCCTCTAGATAGAGAACAAGCTATAATTGCTCTTTGGAAATATTCGCTTGGTGGAAAAAAATGTATTGACACTTTAATGCAGTTTCCTGGATGTATTAATCTTGTTGTGAACCTCCTTAGATCAGAGTCTAGTTCAGCATGTGAGGCAGCTGCAGGCCTTCTGCGATCATTATCTTCGGTCAATCTATATAGGAATTCTGTAGCAGACAGTGGTGCAATAGAAGAGTTAAATAGACTGCTGAGTCAATCTTCCTTGGCAACTGAGGTAAAGGAGCAGAGTATGAGTACACTGTGGAATTTATCTGTGGATGAGAAGCTCTGCATTAAAATTGCAAAGAGTGATATTCTGCTGTTAGCTATTAAGTATCTTGATGACGAGGATATGAAAGTGAAGGAAGCTGCAGGAGGCATTTTGGCAAATTTAGCACTGAGCCGTGCTAATCACAACATCATGGTTGAAGCAGGTGTTATACCAAAATTGGCAAAGTTCTTAACGTCGAACTCAGAAGGATCTAAAGTCATTAGAAAGGAAGCAAGGAATGCATTGCTGGAACTTGTTAAGGACAAGTATTATAGAATTCTTGTTATTGAGGAAGGTTTGGTTCCTGTGCCATTAATAGGTGCTGCAGCCTATAAGTCATTCAACCCAGGTTTACATTTGTGGCCCACATTACCAGATGGTACAGAAATTGAAAGGGCTTCTAGTCAACCTTCCAGATTTGGTGCATCGGAATTACTTCTTGGATTAAATATTGATGACAAGAATGCTAACATAGAGGAAGCAAAAATCAATGCAATTGTTGGACGGACACAACAACAATTCCTTGCTCGTATTGGGGCTATAGAAATGGAAGAAAAGACAATACCTCATTCTGAATGCTCAAATGATCAGCGGCTTACACTTTTACCTTGGGTGGATGGTGTTGCTCGTTTAGTATTGATACTAGAACTAGAAGATCAATCAGCCATATTAAGAGCTGCAGAGTCAATTGCTAGTGCATGTATCAACGAACATATGCGTATTGCATTCAAGGAGGCTGGGGCAATTAGGCATTTAGTACGTCTTTTGACTTGTGATGATAATGCGGTCCAGTTAGCGGTAACACAAGCTTTGGAAAGGCTGTCTGCTAGCAATGTTGTTTGCCGAGTAATTGAAGCTGAGGGTGTTTTAGGTCCTTTAGTCAGTATTTTGAAATGCTCAGAGATAGCTGAAACTATTGTGGAAAAGTCTTTGAACATACTTGCACGGATATTAGACCCCAGTAAAGAGATGCAATTGAAGTACATTGATTCTTTTCAGTTTTATGATGGATCAGTTAATGAATCTGAGAAGAAGGCATTTGGTGGAGCCAAAAATGATGATATCTCAACAGGATTAAGTAGCACTGAGCAAGCCGTATCAAAAACAAATACCAGGAATGATATACTAGATTCTGTTTTCATTGCAAAACTTGTTGAGATTCTAAAGTCCTCTTCACCCAATTTACAAGAAAAGGCTGCATCTGTGCTCGAGTTTGTGGCATTGACTGACCCAACTCTTGACCCAATTATATCTGTGGATATTGAAAATGGTCTCAATTCTGCTTTTCAGCAAAAAATTTTGAAAATTTCAGTGGACATGGAATCTGATGTAGAAGATCAGTTTTCAGAAGCATATGCTATTGAATTTGAAGAAGCTGGTCTTGCAATATCTGCAGCATCCCGGTTACTAACAAGACTACTGGATTGTGAGCAGTTTCGTCATAAAATAAATTTCTCCAATTTTATTGGTATGCTTCGTGAAATCCTCAGGTCCAATATTCCCCTCCACAACAAAGATTGGGTAGCTGCTTGCCTAGTTAAACTAAGTTCTCTCTCTGGTCACAACATGAGTTTTAATCCAATCAACGTGGAAGTTACACTTTATGAGACAATCCCAAGACTTGTAGAACAGATCAAAACTTCATTCTCACCAGAAGCACAGGAAGATGCTGTTGTAGAACTTAATAGAATAATATCTGAAGGAGTGGTAGATTCCACAGAAGCTATTATTTCTGGGGGTGCAGTATATCCATTGGTGAAGCTGATTGAAGATGGCAGTGAAAGGGCTGTTGAAGCAAGCTTGGCAATACTGTATAATCTGAGTATGGACAGTGAGAACCATTCTGCACTTGTGGCTGCTGGAGCAGTCCCAGCCTTGAGAAGATTTGTTCTATCACACAGACCACAGTGGGAAAAGGCACTTCTTTTACTAAGGAGTTTGCAAATGTGA 2652 0.4027 KKPILFLPRGGISETETYLLFFHSSVSFCYSYLSSSILANNMLASTLLTPSNLNPSHFLPPTTRLSEFLPRSRVAFSSKSNTKISLVVRLSTNGHDGAVDATSLQGIDAVESESSGLGDGYVALFVRMLGLDRDPLDREQAIIALWKYSLGGKKCIDTLMQFPGCINLVVNLLRSESSSACEAAAGLLRSLSSVNLYRNSVADSGAIEELNRLLSQSSLATEVKEQSMSTLWNLSVDEKLCIKIAKSDILLLAIKYLDDEDMKVKEAAGGILANLALSRANHNIMVEAGVIPKLAKFLTSNSEGSKVIRKEARNALLELVKDKYYRILVIEEGLVPVPLIGAAAYKSFNPGLHLWPTLPDGTEIERASSQPSRFGASELLLGLNIDDKNANIEEAKINAIVGRTQQQFLARIGAIEMEEKTIPHSECSNDQRLTLLPWVDGVARLVLILELEDQSAILRAAESIASACINEHMRIAFKEAGAIRHLVRLLTCDDNAVQLAVTQALERLSASNVVCRVIEAEGVLGPLVSILKCSEIAETIVEKSLNILARILDPSKEMQLKYIDSFQFYDGSVNESEKKAFGGAKNDDISTGLSSTEQAVSKTNTRNDILDSVFIAKLVEILKSSSPNLQEKAASVLEFVALTDPTLDPIISVDIENGLNSAFQQKILKISVDMESDVEDQFSEAYAIEFEEAGLAISAASRLLTRLLDCEQFRHKINFSNFIGMLREILRSNIPLHNKDWVAACLVKLSSLSGHNMSFNPINVEVTLYETIPRLVEQIKTSFSPEAQEDAVVELNRIISEGVVDSTEAIISGGAVYPLVKLIEDGSERAVEASLAILYNLSMDSENHSALVAAGAVPALRRFVLSHRPQWEKALLLLRSLQM. 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06469 883 Gene3D - 691 882 IPR011989 -
Seca9g06469 883 Gene3D - 426 653 IPR011989 -
Seca9g06469 883 Gene3D - 118 347 IPR011989 -
Seca9g06469 883 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 814 856 IPR000225 GO:0005515
Seca9g06469 883 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 79 882 - -
Seca9g06469 883 Pfam Armadillo/beta-catenin-like repeat 470 510 IPR000225 GO:0005515
Seca9g06469 883 SUPERFAMILY ARM repeat 438 645 IPR016024 -
Seca9g06469 883 SMART arm_5 278 321 IPR000225 GO:0005515
Seca9g06469 883 SMART arm_5 194 236 IPR000225 GO:0005515
Seca9g06469 883 SMART arm_5 152 193 IPR000225 GO:0005515
Seca9g06469 883 SMART arm_5 602 642 IPR000225 GO:0005515
Seca9g06469 883 SMART arm_5 844 882 IPR000225 GO:0005515
Seca9g06469 883 SMART arm_5 237 277 IPR000225 GO:0005515
Seca9g06469 883 SMART arm_5 511 553 IPR000225 GO:0005515
Seca9g06469 883 SMART arm_5 803 843 IPR000225 GO:0005515
Seca9g06469 883 SMART arm_5 470 510 IPR000225 GO:0005515
Seca9g06469 883 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 205 238 IPR000225 GO:0005515
Seca9g06469 883 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 164 206 IPR000225 GO:0005515
Seca9g06469 883 SUPERFAMILY ARM repeat 125 341 IPR016024 -
Seca9g06469 883 SUPERFAMILY ARM repeat 604 864 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06469 Seca-Chr9 182564159 182573037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g06469 120 340 U-box Gene Family AT2G23140 29.911 1.05e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06469 - - gmx:100810447 1314.29