Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06435 ATGGCTGCAGTGGAAGAAATTGGTTTGAAGGTAGCAACTGATCTGGATGGCAAAAGCTGTGAAAAAGTAGCGCCACATGTGAATGAACCAGTGTATGTTTGGAGGAATGATTCTTTTGTTGCTGCATTTCCTTCAGAACTGGTTCGCATAACTTATGGCATCAACTTTCCACAGGCTCCTGCTATTGGCTGCCAGTGGTTTTCTACAACCCCCTTGGATAATTTGATTTATTCCACGCAGATAGCTTTGTCAAGAACCTTCTGCATTTATGAGGAGGTTGAGCAAATGCGCAATGCTGGACTTATCAAAGGGGGTTCTCTAGAAAATGCGATTGTGTGCAGTGCCAGTAAAGGTTGGTTGAATCCACCTCTGCATTTCAGTGATGAACCATGTCGGCACAAGATTTTAGATCTTATTGGTGATCTCTCGCTGTTTGCTCAGTTTGGTAATCAAGGACTCCCAGTGGCACACATCATAGCTTACAAGGGTGGCCATGCATTGCATGCTGATTTGGCACGCCGCCTGATAGGAATGATGTGA 540 0.4481 MAAVEEIGLKVATDLDGKSCEKVAPHVNEPVYVWRNDSFVAAFPSELVRITYGINFPQAPAIGCQWFSTTPLDNLIYSTQIALSRTFCIYEEVEQMRNAGLIKGGSLENAIVCSASKGWLNPPLHFSDEPCRHKILDLIGDLSLFAQFGNQGLPVAHIIAYKGGHALHADLARRLIGMM. 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06435 179 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 2 177 IPR004463 GO:0008759|GO:0009245
Seca9g06435 179 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 21 176 IPR004463 GO:0008759|GO:0009245
Seca9g06435 179 SUPERFAMILY Ribosomal protein S5 domain 2-like 29 176 IPR020568 -
Seca9g06435 179 Gene3D lpxc deacetylase, domain 2 26 179 IPR011334 GO:0008759|GO:0009245
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06435 Seca-Chr9 182009669 182018155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g06435 3 175 Carbohydrate Esterase AT1G25054 67.052 7.37e-85 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06435 K02535 - gmx:100814465 344.354