Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06420 ATGCTTGCCTTTGCAGCAATAATTGCATCCCTTCTCTACTTCCTATTCTTCTTCCATCACAAACAATGTTGCAAATACCCTCTCATGACACACTACCCTCTCCTTGGCATGTTACCACAAATCCTTTGGAACTCATGGCGGATCCATGATTTCTTGACCGAGTTATTGAAACGACACGGTGGCACTGGTGAGTTCATGGGACCTTGGTTCACCAAAATGAACTATATGATCACTAGTGACCCCATCAATGTACACCACATCATGAGCAAGAGTTTTGATAACTATGTTAAAGGCCCTGAGTTTCGTGAGATTTTCCAAGAAGCCTTCGGAGATGGGATATTCACTGTTGATTCAGACACATGGAAATACAACAGGTCTCTCCTCCATTCTTTGTTTAAACAAAGAAGCTTCCAGATGTTTCTAGAGAAAACCATTCAAAACAAGGTGGAGACCAAGCTACTCCCAATATTAGATAATAATAATCATGTGATGGTGGTGGATCTTCAAGATGTCTTTTGTCGGTTCACATTTGATAACATATGTTCCATAGTTATGGGACATGATCCTAATTGCCTTTCCATTGATTTCCCACAAGTTGCATGTGAGAAGGCTTTTAACGAAGCTGAAGAGTCCATATTCTATAGACACATAGTGCCAAAATGTGTGTGGAAGTTGCAAAAATGGCTTCAAATTGGTCAAGAGAAGAAGATGGTTGAAGCATGTGAAACATTTGACCAATTCCTATTTGCATGTATAGGGTCTAAGAGAGAAGAGCTAAAAAGGGGTGAAACTCCCCTTATGCAAGGTCTCGGATTTAAATCCGTGCCGGGAGAATTAGCCCCACCAGAATATGAATCCGCGCCGGAAGAGTTAACCCCACCAGAATGTGGATGTTCTCGGCTGAAGCAGAATTGCCGAATACCTGTCATTCACACCAAAAAAATGGATGAAGGTCAAGTTGACTTGCTAACATCTTTGATGAGAGAACAAGTCCATGATGATGACAAGTTTCTAAGGGATGTTGCATTTAATCTTTTTGTGGCAGGGAGAGATACCATAGCTTCAGCTCTTACATGGTTCTTTTGGCTTGTTGCTACAAATCCATTAGTTGAAGCAAAGATTCTTGAAGAGATGAAAGATAATAATTTGGTAGGTAATAATAATAAGAAAGGGGTTTTATGCATGGAGGAGATGGAAAATTTAGTGTATCTCCATGGTGCTATATGTGAAGCTTTGAGGCTTTTTCCTCCTATACCTATTGAGCGCAAGCAAGCAATCAAAGCTGACATACTTCCTAGTGGTCACCGTATTGACCCCAATACAGTGATATTGTTTTCTTTGTATGCAATGGGGAGATCTGAAGAAATTTGGGGAAAAGATTGCTTGGAATTTAAGCCTGAGAGATGGATCTCTGAGAGAGGAAGCATTGTTTATGTGCCATCTTACAAATTCATTAGTTTTAATGCAGGGCCTAGGACTTGCTTGGGAAAGGACTTATCCTTCATTCAAATGAAGATGGTTGCAACCTCTATTTTGCTTAACTATCGTGTTCAATTGGTGGAAGGTCATGTTGCTAACCCGAGCCTTTCAATTGTTCTTCTTATGAAGCATGGTTTGAAGGTTAGGATAAGAAAAAGAGAAATTTAA 1647 0.4007 MLAFAAIIASLLYFLFFFHHKQCCKYPLMTHYPLLGMLPQILWNSWRIHDFLTELLKRHGGTGEFMGPWFTKMNYMITSDPINVHHIMSKSFDNYVKGPEFREIFQEAFGDGIFTVDSDTWKYNRSLLHSLFKQRSFQMFLEKTIQNKVETKLLPILDNNNHVMVVDLQDVFCRFTFDNICSIVMGHDPNCLSIDFPQVACEKAFNEAEESIFYRHIVPKCVWKLQKWLQIGQEKKMVEACETFDQFLFACIGSKREELKRGETPLMQGLGFKSVPGELAPPEYESAPEELTPPECGCSRLKQNCRIPVIHTKKMDEGQVDLLTSLMREQVHDDDKFLRDVAFNLFVAGRDTIASALTWFFWLVATNPLVEAKILEEMKDNNLVGNNNKKGVLCMEEMENLVYLHGAICEALRLFPPIPIERKQAIKADILPSGHRIDPNTVILFSLYAMGRSEEIWGKDCLEFKPERWISERGSIVYVPSYKFISFNAGPRTCLGKDLSFIQMKMVATSILLNYRVQLVEGHVANPSLSIVLLMKHGLKVRIRKREI. 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06420 548 PANTHER CYTOCHROME P450 20 541 - -
Seca9g06420 548 CDD CYP86A 64 539 - -
Seca9g06420 548 SUPERFAMILY Cytochrome P450 29 546 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06420 548 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 487 496 IPR017972 GO:0005506|GO:0016705
Seca9g06420 548 Pfam Cytochrome P450 30 534 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06420 548 PRINTS E-class P450 group I signature 484 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06420 548 PRINTS E-class P450 group I signature 405 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06420 548 PRINTS E-class P450 group I signature 337 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06420 548 PRINTS E-class P450 group I signature 357 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06420 548 PRINTS E-class P450 group I signature 494 517 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06420 548 PRINTS P450 superfamily signature 485 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06420 548 PRINTS P450 superfamily signature 348 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06420 548 PRINTS P450 superfamily signature 406 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06420 548 PRINTS P450 superfamily signature 494 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06420 548 Gene3D Cytochrome P450 13 548 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06420 Seca-Chr9 181735727 181737373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g06420 1 547 Cytochrome P450 AT2G23180 43.739 1.89e-158 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06420 - - gmx:100779590 729.939