Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06411 ATGGAGAGTAACAAAATTGGAGAAAATGGAAGGAGAAAGGAGGCTGAGGGAAGTGATGCAGAGAAACAAGATGAAGAGGTTTTAAAGAAGATTATTGCAAGCCATCCTTTGTATGAAGTGTTGATTGAATCTCATATCAACTGCTTGAAGGTTGGATCTGAGGAAGCTGAAGGGTTTGATATAACAAATGATGCATGGAAGAAGCTGGTCAACTCAAAGTTCAAATCAACTACTAATCCAAACACTTCTGAGCTTGATCACTTCATGGAAGCATATTGCGTGGCACTGAGCAAGCTGAAAGAAGCAATAGAGGAACCAACAAAAGAAGCAAAAGCTTTCATCAATGCGACGTATGCTCAACTGAAGGAACTCAATGAAGCAAATAATCCACAACATTTGATAATTAAGCAACAAGAACCTTGA 423 0.3877 MESNKIGENGRRKEAEGSDAEKQDEEVLKKIIASHPLYEVLIESHINCLKVGSEEAEGFDITNDAWKKLVNSKFKSTTNPNTSELDHFMEAYCVALSKLKEAIEEPTKEAKAFINATYAQLKELNEANNPQHLIIKQQEP. 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06411 140 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 1 130 - -
Seca9g06411 140 SMART KNOX2_2 75 126 IPR005541 GO:0003677|GO:0005634
Seca9g06411 140 Pfam KNOX1 domain 28 52 IPR005540 GO:0003677|GO:0005634
Seca9g06411 140 Pfam KNOX2 domain 83 124 IPR005541 GO:0003677|GO:0005634
Seca9g06411 140 SMART KNOX1_2 26 65 IPR005540 GO:0003677|GO:0005634
Seca9g06411 140 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06411 Seca-Chr9 181589936 181592315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g06411 24 134 Homeobox Transcription Factor Family AT4G08150 33.043 1.33e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06411 - - gmx:102669720 189.119