Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06408 ATGAATCCCTTACCAAATGAAAGGGAAGAAGATTGGCTTGGTGCCCTTCTGAGGATCAAGATTGGCAATTGTGAAGAACACCAGGACCTTAAGTTCAATGAGAAGAATGTGTTCTGTGTAGACTGTGCAGTTAGCTTTTGTAGGTACTGTAAGGAAGCTCATTCCCTCCATCGCAGATTTCAGATATACAAATATTGCTATCATGATGTTGTTCGCCATTCTGATCTACACAAGTATTTTGACTGCTCAAATATTCAAACTTATATATCCAATAATGACAAGATTGTGCATCTCAAACCCCGGCCATCATCCAAAGATATCAAACTAGCAAAAAGATCTAAAGCTGCTAATAGAAGCCCTGAGTCTCAAGCCAAAGAAACCAAAACATCAACACCTCCAAAATGGGGTGGTTCTTGTGAAGAATGTGGAAGACATTTACAAGATAACCGTAATAGATTCTGCTCCATCACATGCAAGGTAACAAGAATCTCAGTGGAGCCCCAAAACCAAGGAATTGAAGAAAATTCTGTAGAGAAAAATCAATCTTCACAAAGGATTTCAGAGGAGCCTGTCAACCAAATCTCAGAAACAGAGATATCATCTATCACTGTAGTTGCTGAGCCATATGAATGTGTTGAAAAAGTGAATTTCAGAAAGCGCCCAAGGAAATCCACCCCTCACAGAGCTCCCTTTTTTTGA 699 0.3963 MNPLPNEREEDWLGALLRIKIGNCEEHQDLKFNEKNVFCVDCAVSFCRYCKEAHSLHRRFQIYKYCYHDVVRHSDLHKYFDCSNIQTYISNNDKIVHLKPRPSSKDIKLAKRSKAANRSPESQAKETKTSTPPKWGGSCEECGRHLQDNRNRFCSITCKVTRISVEPQNQGIEENSVEKNQSSQRISEEPVNQISETEISSITVVAEPYECVEKVNFRKRPRKSTPHRAPFF. 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06408 232 MobiDBLite consensus disorder prediction 99 136 - -
Seca9g06408 232 Pfam PLATZ transcription factor 64 160 IPR006734 -
Seca9g06408 232 ProSiteProfiles Zinc finger B-box type profile. 19 62 IPR000315 GO:0008270
Seca9g06408 232 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 231 - -
Seca9g06408 232 MobiDBLite consensus disorder prediction 169 192 - -
Seca9g06408 232 MobiDBLite consensus disorder prediction 99 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06408 Seca-Chr9 181563446 181565228 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Seca9g06408 PLATZ 4.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06408 - - gmx:100820425 298.901