Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06407 ATGGCCCTCTCTTTCACCATCCACACCCATTTCTTCTTCTTCTTCTTGTTGTTGTTGTTCCTCTGCAATCTTCAACCTTTACTTGCTCAACAACAACAACTCAAATCCTTCAACATCTCACTCTCTCCATGGCTCCCTTCACAGAACAAAATCCTTATCTCCCCCAATTCCAATTTCACTGCTGGCTTCTTTCCTATACCCAATTCCCCAAACAACTTCACCTTCTCTGTTTGGTTCTCCAAAGTCCCCAAAAATGCAAACCCTGTTGTATGGAACGCCACCACAACCTCTTCCCAAACCCTATTCATCAACAACTCTTCCTCCCTTGTAATCACCTCAAAAGGGGAACTTTTTCTCCATGGCTCCCCCATCGGTGACAATGCTTCTTCCTCTTCCAATTCCACACAACTCCACCTTCTTGACAATGGAAACTTAGTCTTTGGAGACTGGAGCAGCTTTGCAGATCCAACCAACACCATCTTGCCCAACCAAAGCATCAGTGGGAATATCACCATTCGTTCTAATAATGGGAAATTCAAGTTTGTTAAGTCTCAGTGTTTGGCTCTACAAGAGAATTCCACCTGTGTCTCTGATGACAAGTACTATAGCACCCCAAATGCTTTATTGAGCATGGACAATGATGGGAAAATGAGCATGGTAGGTAACTCTTTTCTTACCTCTGATTATGGTGACCACAGGTTCAGAAAATTGGTTCTTGATGATGATGGGAATCTCAGAATCTACAGTTTCTACCCTGAGCAGCAGAATCAGTGGGTTGAGGTTTGGACAGCAATTTGGGATCTTTGCACAATCAAAGGCAAATGTGGTCCTTATGCTATCTGTGTGCCAAGAGAAGATTTGTATAATGTAACTGATTGTGTTTGCCCATCTGGGTTCAAGGAACTTCCAGGTGGGGCTGAGAAAGGTTGCACAAGAAAGATTCAACTTTCAAGCAACATTGATTTCCTCAGGCTAGACTATGTAAACTACACCAGCAATGGTAAGATGAATCCAATCAATGCTGGGAATTTCACAACTTGTGAATCCAGCTGTAGAAAAGACCCAAAATGTCTTGGGTTTGGATTCAAGTATGATGGATCAGGCTATTGTGTTTTGCTACCAGGAACACAGCTTCAATATGGTCACTGGTCACCAGGAACTGAAACTGCCTTCTTTATGAGAGTTGACAAATCTGAAACAGAAGCCTCCAATTTCACTGGGTTGACCCAAGTGATGCAAACAACATGCCCTGTTAACATAAGCCTTCCACTTCCACCTAAGGACTCAAACACCACCACCAGAAACATTGTCATAATTTGCACCCTTTTTGCTGCAGAACTCATAGCTGGGGTGGCTTTCTTCTGGTCTTTCCTCAAGAGGTACATCAAGTACAGAGACATGGCTACCACATTAGGCCTTGAGCTTTTACCTGCTGGTGGCCCCAAAAGGTTCACATACTCAGAGATCAAAGCTGCCACCAATGACTTTTCCAACCTCATAGGGAAAGGTGGCTTTGGAGATGTCTACAAAGGGGAGTTACCTGACCACCGTGTGGTTGCCGTGAAGTGCCTCAAGGATGTCACCGGCGGTGATGCTGAGTTTTGGGCAGAGGTCACTATCATTGCCAGGATGCACCATCTCAACTTGGTTCGTTTGTGGGGTTTCTGTGCTGAGAAAGGGAAAAGGATACTTGTCTATGAGTACATCCCTGGTGGCTCATTGGACAAGTATTTGTTCCGGGCCAAGTCTTCAAAGCCCAACTCAAAAGAGTCTGATTCAAGTAATGCCACAAACCCAAGCCTAAGCCCAAGCCTAAGCCCAAACCCAAACACTCAAGATAAGCCCATTTTGGATTGGAGCATGAGGTACAGGATTGGTCTTGGTGTGGCCCGGGCTATTGCATACTTGCATGAAGAGTGTTTGGAATGGGTTCTGCATTGTGATATAAAGCCCGAGAACATTCTGCTAGGTGATGATTTTTGTCCCAAGATATCAGATTTTGGGTTGGCAAAACTGAGGAAAAAAGAGGATATGGTGACTATGTCTAGGAGGAGAGGAACTCCTGGTTATATGGCTCCTGAATGGATCACTACAGATCCAATAACCTCTAAGGCTGATGTGTATAGTTTTGGGATGGTGCTATTGGAGCTTGTGAGTGGAGTGAGGAACTTTGAGGTCCAAAGTTCTGAGGTGAAAAGTGAGGAGTGGTATTTCCCAGGATGGGCTTTTGATAAGATGTTTAAGGAGATGAATGTGGATGACATTTTGGATAGTAAGATTAGGGAAGTTTATGATAGTAGGGCACATTTTGAATTGGTTAATAGAATGGTGAAGACAGCAATGTGGTGCCTGCAGGATAGGCCTGAGATGAGGCCTACAATGGGAAAGGTGGCTAAGATGTTGGAAGGGACTGTGGAGATCATTGAGCCCAAGAAGCCCACTGTTTACTACCTTGCTGAAGAGTAA 2466 0.444 MALSFTIHTHFFFFFLLLLFLCNLQPLLAQQQQLKSFNISLSPWLPSQNKILISPNSNFTAGFFPIPNSPNNFTFSVWFSKVPKNANPVVWNATTTSSQTLFINNSSSLVITSKGELFLHGSPIGDNASSSSNSTQLHLLDNGNLVFGDWSSFADPTNTILPNQSISGNITIRSNNGKFKFVKSQCLALQENSTCVSDDKYYSTPNALLSMDNDGKMSMVGNSFLTSDYGDHRFRKLVLDDDGNLRIYSFYPEQQNQWVEVWTAIWDLCTIKGKCGPYAICVPREDLYNVTDCVCPSGFKELPGGAEKGCTRKIQLSSNIDFLRLDYVNYTSNGKMNPINAGNFTTCESSCRKDPKCLGFGFKYDGSGYCVLLPGTQLQYGHWSPGTETAFFMRVDKSETEASNFTGLTQVMQTTCPVNISLPLPPKDSNTTTRNIVIICTLFAAELIAGVAFFWSFLKRYIKYRDMATTLGLELLPAGGPKRFTYSEIKAATNDFSNLIGKGGFGDVYKGELPDHRVVAVKCLKDVTGGDAEFWAEVTIIARMHHLNLVRLWGFCAEKGKRILVYEYIPGGSLDKYLFRAKSSKPNSKESDSSNATNPSLSPSLSPNPNTQDKPILDWSMRYRIGLGVARAIAYLHEECLEWVLHCDIKPENILLGDDFCPKISDFGLAKLRKKEDMVTMSRRRGTPGYMAPEWITTDPITSKADVYSFGMVLLELVSGVRNFEVQSSEVKSEEWYFPGWAFDKMFKEMNVDDILDSKIREVYDSRAHFELVNRMVKTAMWCLQDRPEMRPTMGKVAKMLEGTVEIIEPKKPTVYYLAEE. 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06407 821 ProSiteProfiles PAN/Apple domain profile. 310 396 IPR003609 -
Seca9g06407 821 Gene3D Transferase(Phosphotransferase) domain 1 598 812 - -
Seca9g06407 821 FunFam S-receptor-like serine/threonine-protein kinase 466 568 - -
Seca9g06407 821 Gene3D Phosphorylase Kinase; domain 1 468 568 - -
Seca9g06407 821 MobiDBLite consensus disorder prediction 588 612 - -
Seca9g06407 821 Gene3D - 155 270 IPR036426 -
Seca9g06407 821 Gene3D - 43 154 IPR036426 -
Seca9g06407 821 PIRSF SRK 5 821 IPR024171 GO:0004674
Seca9g06407 821 ProSitePatterns Protein kinases ATP-binding region signature. 500 522 IPR017441 GO:0005524
Seca9g06407 821 PANTHER OS07G0415500 PROTEIN 13 814 - -
Seca9g06407 821 Pfam S-locus glycoprotein domain 230 300 IPR000858 GO:0048544
Seca9g06407 821 MobiDBLite consensus disorder prediction 585 612 - -
Seca9g06407 821 Pfam Protein kinase domain 498 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g06407 821 FunFam Serine/threonine-protein kinase 569 812 - -
Seca9g06407 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Seca9g06407 821 ProSiteProfiles Protein kinase domain profile. 494 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g06407 821 SMART serkin_6 494 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g06407 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 89 171 IPR036426 -
Seca9g06407 821 CDD STKc_IRAK 500 803 - -
Seca9g06407 821 SUPERFAMILY Protein kinase-like (PK-like) 477 802 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06407 Seca-Chr9 181547424 181549889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g06407 328 813 Receptor kinase-like Gene Family AT4G18250 32.937 5.68e-77 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Seca9g06407 Pkinase 1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06407 - - gmx:100775518 1245.34