Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06377 ATGACTGTGGATGAAGTGGATAGTAGCTCTGAGTGGAGCAGAGAACAGGATAAAGCATTTGAAAATGCCTTGGCAACTCATCCAGAAGATGCTTCAGATCGATGGGAGAAGATTGCAGCTGATGTACCAGGGAAGACTATAGAAGAAATTAAACAGCATTATGAGCTCTTGGTTGATGATGTTAACCAGATCGAAGCTGGTTGTGTGCCTCTACCATCTTATAATTCTTCTTCAGAGGGAAGCCATGCTAGTGATGAAGGAGCTGGCAAGAAGGGGCACTGTAACAGTGAGGGAACTAAGGCTTCAAGATCAGATCAGGAAAGGAGAAAGGGTATTGCTTGGACAGAGGAGGAACACAGTTTTAAAGTTTCAAATTGGTTGAACAGGTTGTTTCTTCTGGGATTGGACAAGTATGGAAAAGGCGACTGGCGAAGTATATCAAGGAACTTTGTGGTGACTAGAACACCAACACAAGTAGCAAGCCATGCCCAGAAATACTTCATTCGTCTGAACTCGATGAACAAAGACAGAAGGCGATCTAGCATACATGATATCACCAGTGTTAACAATGGAGACATTTCAGCACCTCAAGGACCAATAACAGGACAAACCAATGGCTCTGCTACAAATTCTGCTAGCAAATCAGGCAAACAAGCCCCTCCAGCCTCAACAGGTGCAGGAATATATGCTGCTCCCACCATAGGACAACCTATAGGAGGACCCCTTGTATCTGCTGTTGGCACCCCAGTGAATCTCCCTGCTCCTGCACACATGGCATATGGTGTTAGAGCCCCAGTTCCTCCTGGTGCAGTTGTGCCTGGTGCACCAGTGAACATGGCCCCTATGACATACCCTATGTCACATACATCTGCTCCTCACAGGTAA 885 0.461 MTVDEVDSSSEWSREQDKAFENALATHPEDASDRWEKIAADVPGKTIEEIKQHYELLVDDVNQIEAGCVPLPSYNSSSEGSHASDEGAGKKGHCNSEGTKASRSDQERRKGIAWTEEEHSFKVSNWLNRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDISAPQGPITGQTNGSATNSASKSGKQAPPASTGAGIYAAPTIGQPIGGPLVSAVGTPVNLPAPAHMAYGVRAPVPPGAVVPGAPVNMAPMTYPMSHTSAPHR. 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06377 294 MobiDBLite consensus disorder prediction 178 224 - -
Seca9g06377 294 CDD SANT 11 58 IPR001005 -
Seca9g06377 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 105 171 IPR017930 -
Seca9g06377 294 MobiDBLite consensus disorder prediction 73 109 - -
Seca9g06377 294 PANTHER TRANSCRIPTION FACTOR KUA1 8 289 - -
Seca9g06377 294 MobiDBLite consensus disorder prediction 84 109 - -
Seca9g06377 294 FunFam Transcription factor SRM1 4 71 - -
Seca9g06377 294 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Seca9g06377 294 SMART sant 110 169 IPR001005 -
Seca9g06377 294 SMART sant 8 60 IPR001005 -
Seca9g06377 294 CDD SANT 113 167 IPR001005 -
Seca9g06377 294 MobiDBLite consensus disorder prediction 184 220 - -
Seca9g06377 294 Gene3D - 113 173 - -
Seca9g06377 294 Gene3D - 5 71 - -
Seca9g06377 294 MobiDBLite consensus disorder prediction 8 35 - -
Seca9g06377 294 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Seca9g06377 294 Pfam Myb-like DNA-binding domain 126 167 IPR001005 -
Seca9g06377 294 SUPERFAMILY Homeodomain-like 108 172 IPR009057 -
Seca9g06377 294 FunFam transcription factor MYB1R1 112 172 - -
Seca9g06377 294 ProSiteProfiles Myb-like domain profile. 10 58 IPR001005 -
Seca9g06377 294 SUPERFAMILY Homeodomain-like 10 65 IPR009057 -
Seca9g06377 294 NCBIfam myb-like DNA-binding domain, SHAQKYF class 112 169 IPR006447 GO:0003677
Seca9g06377 294 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06377 Seca-Chr9 181048047 181052406 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Seca9g06377 Myb_DNA-binding 4.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06377 - - gmx:100779792 477.248